RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 LINC01590Q5TEZ4 76 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 TRIQKQ629K1 86 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 GPR139Q6DWJ6 353 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 LYPD8Q6UX82 237 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 DBX2Q6ZNG2 339 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 CEACAM19Q7Z692 300 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 Q8N402 240 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF511Q8NB15 262 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 ST8SIA1Q92185 356 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 RASL10BQ96S79 203 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 MMP28Q9H239 520 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 GNG8Q9UK08 70 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 COPS3Q9UNS2 423 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 HRH3Q9Y5N1 445 aa16.81■□□□□ 0.28
HOXA9-201ENST00000343483 IGHV1-45A0A0A0MS14 117 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 FAM25AB3EWG3 89 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 FAM25CB3EWG5 89 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 FAM25GB3EWG6 89 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 TFECO14948 347 aaPredicted RBP16.8■□□□□ 0.28
HOXA9-201ENST00000343483 FBXO45P0C2W1 286 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 MYL9P24844 172 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 PTBP1P26599 531 aaKnown RBP eCLIP16.8■□□□□ 0.28
HOXA9-201ENST00000343483 SUMO3P55854 103 aaPredicted RBP16.8■□□□□ 0.28
HOXA9-201ENST00000343483 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
HOXA9-201ENST00000343483 KCNJ8Q15842 424 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 SLC6A19Q695T7 634 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 HBMQ6B0K9 141 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 C19orf18Q8NEA5 215 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 STK35Q8TDR2 534 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 ELP5Q8TE02 316 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 FAM210AQ96ND0 272 aa16.8■□□□□ 0.28
HOXA9-201ENST00000343483 CCDC86Q9H6F5 360 aaKnown RBP16.8■□□□□ 0.28
HOXA9-201ENST00000343483 DCTN6O00399 190 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 ARHGEF9O43307 516 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 OR6A2O95222 327 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 RENP00797 406 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 DMKNQ6E0U4 476 aaPredicted RBP16.79■□□□□ 0.28
HOXA9-201ENST00000343483 EXD3Q8N9H8 876 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 SPACA9Q96E40 222 aaPredicted RBP16.79■□□□□ 0.28
HOXA9-201ENST00000343483 PELI1Q96FA3 418 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 PGLYRP3Q96LB9 341 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 SYT4Q9H2B2 425 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 B4E171 279 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 XKRYO14609 159 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 PLA2G10O15496 165 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 TSPAN7P41732 249 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 FOXF1Q12946 379 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 CDONQ4KMG0 1287 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 DCAF12Q5T6F0 453 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 RSBN1Q5VWQ0 802 aaPredicted RBP16.79■□□□□ 0.28
HOXA9-201ENST00000343483 SYS1Q8N2H4 156 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 UBE2J2Q8N2K1 259 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 OR2Y1Q8NGV0 311 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 OR2T4Q8NH00 348 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF417Q8TAU3 575 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 RNF138Q8WVD3 245 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF587Q96SQ5 575 aaPredicted RBP16.79■□□□□ 0.28
HOXA9-201ENST00000343483 MOKQ9UQ07 419 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 LOXL2Q9Y4K0 774 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 WIF1Q9Y5W5 379 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 HS3ST3B1Q9Y662 390 aa16.79■□□□□ 0.28
HOXA9-201ENST00000343483 SHISA8B8ZZ34 492 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 OR2T1O43869 369 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 ITGA10O75578 1167 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 COX6A1P12074 109 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 ELK1P19419 428 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF41P51814 821 aaPredicted RBP16.78■□□□□ 0.28
HOXA9-201ENST00000343483 GBX2P52951 348 aaPredicted RBP16.78■□□□□ 0.28
HOXA9-201ENST00000343483 NTRK2Q16620 822 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 C5orf46Q6UWT4 87 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 PM20D2Q8IYS1 436 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 OR6V1Q8N148 313 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 THAP4Q8WY91 577 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 GHSRQ92847 366 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 LOXL4Q96JB6 756 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 ZNF700Q9H0M5 742 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 B3GAT2Q9NPZ5 323 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 ACOXLQ9NUZ1 547 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 ST6GALNAC2Q9UJ37 374 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 POU2F3Q9UKI9 436 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 PCDHGA5Q9Y5G8 931 aa16.78■□□□□ 0.28
HOXA9-201ENST00000343483 A0A1W2PRG6 482 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 MEIOCA2RUB1 952 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 PSMD9O00233 223 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 HLA-DQB1P01920 261 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 TCEA1P23193 301 aaKnown RBP16.77■□□□□ 0.28
HOXA9-201ENST00000343483 PTGDSP41222 190 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 APOBEC1P41238 236 aaKnown RBP16.77■□□□□ 0.28
HOXA9-201ENST00000343483 FOLR3P41439 243 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 ACKR1Q16570 336 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 ACSM3Q53FZ2 586 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 PXKQ7Z7A4 578 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 TPRA1Q86W33 373 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 ENKURQ8TC29 256 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 MRPL48Q96GC5 212 aaKnown RBP16.77■□□□□ 0.28
HOXA9-201ENST00000343483 SDHAF3Q9NRP4 125 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 EXTL2Q9UBQ6 330 aa16.77■□□□□ 0.28
HOXA9-201ENST00000343483 TVP23AA6NH52 213 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 PLPP3O14495 311 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms