RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ADAM2Q99965 735 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 HRH4Q9H3N8 390 aa16.94■□□□□ 0.3
SMPD1-201ENST00000342245 ZNF107Q9UII5 783 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 CDV3Q9UKY7 258 aaKnown RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3DA0A087WVF3 549 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3IA0A087WXS9 549 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3EA0A087X179 549 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3KA0A087X1G2 549 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3FA6NER0 549 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3LB9A6J9 549 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 NTN1O95631 604 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 RPN2P04844 631 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 IL9P15248 144 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 CEACAM6P40199 344 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3CQ6IPX1 549 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TMED4Q7Z7H5 227 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 HMGN2P46Q86SG4 172 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TBC1D3Q8IZP1 549 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-201ENST00000342245 GABRG1Q8N1C3 465 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 OR56A1Q8NGH5 318 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 OTUB2Q96DC9 234 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 KIRREL1Q96J84 757 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 PDCD1LG2Q9BQ51 273 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 GNG8Q9UK08 70 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 SLC5A10A0PJK1 596 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 CLDN4O14493 209 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 FRS3O43559 492 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 IFNA2P01563 188 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 CD3DP04234 171 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 BSGP35613 385 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 FXYD6P3P58550 94 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 RAB1AP62820 205 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TRA2BP62995 288 aaKnown RBP16.93■□□□□ 0.3
SMPD1-201ENST00000342245 GGTLC2Q14390 218 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 STAC2Q6ZMT1 411 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 HIST2H3AQ71DI3 136 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 OLIG3Q7RTU3 272 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 VRK2Q86Y07 508 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 PAQR4Q8N4S7 273 aaPredicted RBP16.93■□□□□ 0.3
SMPD1-201ENST00000342245 TTC9BQ8N6N2 239 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 ADAMTS17Q8TE56 1095 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 KLK6Q92876 244 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 AMDHD1Q96NU7 426 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 DPH1Q9BZG8 443 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 ATG5Q9H1Y0 275 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 GLIPR2Q9H4G4 154 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 DUSP22Q9NRW4 184 aa16.93■□□□□ 0.3
SMPD1-201ENST00000342245 K7ERQ8 282 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 MBTPS2O43462 519 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 KLKB1P03952 638 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 HKR1P10072 659 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 PGAM2P15259 253 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 NTSP30990 170 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 GSK3AP49840 483 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SLC35F3Q8IY50 421 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 ZNF614Q8N883 585 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 MOGAT1Q96PD6 335 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SLC17A9Q9BYT1 436 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SLCO5A1Q9H2Y9 848 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 LMAN1LQ9HAT1 526 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SLC17A5Q9NRA2 495 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 ADAM29Q9UKF5 820 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SLC7A7Q9UM01 511 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SH2B3Q9UQQ2 575 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 DNAH12Q6ZR08 3092 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 A0A087X0M5 115 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 A0A1B0GX30 115 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 C7orf77A4D0Y5 90 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 STC2O76061 302 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 C1orf105O95561 183 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 RAB3DO95716 219 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 THY1P04216 161 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 NME1P15531 152 aaKnown RBP16.92■□□□□ 0.3
SMPD1-201ENST00000342245 PAX1P15863 534 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 PSMB6P28072 239 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 CTNNB1P35222 781 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 TAS2R38P59533 333 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 CYCSP99999 105 aaKnown RBP16.92■□□□□ 0.3
SMPD1-201ENST00000342245 RHEBQ15382 184 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 FIGNL1Q6PIW4 674 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 LRRTM4Q86VH4 590 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 PMM1Q92871 262 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 SEC22AQ96IW7 307 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 PHB2Q99623 299 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 ZNF559Q9BR84 538 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 RHBGQ9H310 441 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 CYTL1Q9NRR1 136 aa16.92■□□□□ 0.3
SMPD1-201ENST00000342245 ZNF223Q9UK11 482 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-201ENST00000342245 A0A1W2PPH5 198 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 SRPX2O60687 465 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-201ENST00000342245 HLA-AP01891 365 aaKnown RBP16.91■□□□□ 0.3
SMPD1-201ENST00000342245 FCGR3AP08637 254 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 HOXC8P31273 242 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 HTRA4P83105 476 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-201ENST00000342245 TSTA3Q13630 321 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-201ENST00000342245 CCINQ13939 588 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 DHRS11Q6UWP2 260 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 SLC35F2Q8IXU6 374 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms