RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 GABRA6Q16445 453 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ALG10Q5BKT4 473 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 BEX5Q5H9J7 111 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 C9orf135Q5VTT2 229 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CARD17Q5XLA6 110 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ALKBH2Q6NS38 261 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CCDC121Q6ZUS5 278 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 C22orf34Q6ZV56 151 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR4K5Q8NGD3 323 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR51A7Q8NH64 312 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR6X1Q8NH79 312 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 MUS81Q96NY9 551 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ALPK1Q96QP1 1244 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 STX18Q9P2W9 335 aaKnown RBP13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 AURKCQ9UQB9 309 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 POMPQ9Y244 141 aa13.56□□□□□ -0.24
TNFRSF12A-202ENST00000341627 SH3PXD2BA1X283 911 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 MCIDASD6RGH6 385 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 RPL36A-HNRNPH2H7BZ11 118 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 M0R3G1 203 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 EBAG9O00559 213 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 HRGP04196 525 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CDH2P19022 906 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CSNK1A1P48729 337 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 NR1H2P55055 460 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 FOXG1P55316 489 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 PRPS1P60891 318 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 RPS4XP62701 263 aaKnown RBP13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CBX1P83916 185 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CAMK2DQ13557 499 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 LAPTM4AQ15012 233 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 PPA1Q15181 289 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 SEC23BQ15437 767 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 TESK1Q15569 626 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 KLHL24Q6TFL4 600 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 SPATA24Q86W54 205 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 MEX3DQ86XN8 651 aaKnown RBP13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 C20orf196Q8IYI0 205 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR13C2Q8NGS9 318 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 MOSPD2Q8NHP6 518 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ZNF566Q969W8 418 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 PIK3IP1Q96FE7 263 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 SLC25A44Q96H78 314 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 FAM46AQ96IP4 442 aaKnown RBP13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 FUZQ9BT04 418 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 SLC7A8Q9UHI5 535 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CELSR1Q9NYQ6 3014 aa13.55□□□□□ -0.24
TNFRSF12A-202ENST00000341627 TRAV27A0A087WT01 109 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 DHRS12A0PJE2 317 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 DEFB108AA8MXU0 73 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR10H3O60404 316 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 IGHG1P01857 330 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OMPP47874 163 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 MELKQ14680 651 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ACKR1Q16570 336 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ZBED5Q49AG3 693 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ADGRG5Q8IZF4 528 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 LINC00471Q8N535 108 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 TNFRSF13CQ96RJ3 184 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ULBP2Q9BZM5 246 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 YY1AP1Q9H869 796 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 REEP1Q9H902 201 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CRLF2Q9HC73 371 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ITGB1BP2Q9UKP3 347 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 AMDHD2Q9Y303 409 aa13.54□□□□□ -0.24
TNFRSF12A-202ENST00000341627 AKAP6Q13023 2319 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ANKRD17O75179 2603 aaKnown RBP13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CENPBD1B2RD01 187 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 TNFRSF11BO00300 401 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CDC42EP2O14613 210 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 KLF4O43474 513 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 RPL4P36578 427 aaKnown RBP13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 LIMS1P48059 325 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 HMGA2P52926 109 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CLRN1P58418 232 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CTXN1P60606 82 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CEACAM16Q2WEN9 425 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR2T5Q6IEZ7 315 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ANKRD16Q6P6B7 361 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CDC20BQ86Y33 519 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR2T29Q8NH02 315 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CANT1Q8WVQ1 401 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ASB10Q8WXI3 467 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 BOD1Q96IK1 185 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 CHID1Q9BWS9 393 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 TXNIPQ9H3M7 391 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 LIME1Q9H400 295 aa13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 ESRP2Q9H6T0 727 aaKnown RBP13.53□□□□□ -0.24
TNFRSF12A-202ENST00000341627 OBP2BQ9NPH6 170 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms