RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MAKP20794 623 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 CBLP22681 906 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 HOXC5Q00444 222 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 EMX2Q04743 252 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 CASP8Q14790 479 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 SERPINA11Q86U17 422 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF440Q8IYI8 595 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 TAAR8Q969N4 342 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 TXNDC15Q96J42 360 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 TXLNGYQ9BZA5 131 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 NKIRAS2Q9NYR9 191 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 UBAP1Q9NZ09 502 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 MID2Q9UJV3 735 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 MMP24Q9Y5R2 645 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 MS4A18H0YCH9 400 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 RAB36O95755 333 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 GPANK1O95872 356 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 SHBGP04278 402 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 KRT4P19013 534 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 GRPRP30550 384 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 ATP4BP51164 291 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 KLF3P57682 345 aaPredicted RBP13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 COPZ1P61923 177 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 GLO1Q04760 184 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 GNA13Q14344 377 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 MS4A18Q3C1V0 323 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 PCGF3Q3KNV8 242 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 MMEL1Q495T6 779 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 SPRNQ5BIV9 151 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 TMEM255AQ5JRV8 349 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 NHLRC1Q6VVB1 395 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 SPATC1Q76KD6 591 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 SKA3Q8IX90 412 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 GLB1L3Q8NCI6 653 aaPredicted RBP13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 OR52P1PQ8NH57 321 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 SYNPRQ8TBG9 265 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 PNPT1Q8TCS8 783 aaKnown RBP13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 RAB1CQ92928 201 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 CCT8L2Q96SF2 557 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 MMP27Q9H306 513 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 DCAF16Q9NXF7 216 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 ASIC5Q9NY37 505 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 PURGQ9UJV8 347 aaKnown RBP13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 POFUT2Q9Y2G5 429 aa13.85□□□□□ -0.19
NECTIN1-202ENST00000340882 PPIAL4EA0A075B759 164 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 IGHV3OR16-10A0A075B7F0 116 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 A0A096LPI6 279 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 PPIAL4CA0A0B4J2A2 164 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 MDFIC2A0A1B0GVS7 189 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 PPIAL4DF5H284 164 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 TPD52L2O43399 206 aaKnown RBP13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 SERPINA5P05154 406 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 PPIAL4FP0DN26 164 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 NR2F1P10589 423 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 NCF2P19878 526 aaPredicted RBP13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 CDKN2CP42773 168 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 SEC61A1P61619 476 aaKnown RBP13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 TEKQ02763 1124 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF154Q13106 437 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 HFEQ30201 348 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 SPANXN4Q5MJ08 99 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 TREML1Q86YW5 311 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 PEX5LQ8IYB4 626 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 CCL17Q92583 94 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 TIMD4Q96H15 378 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 PPP1R36Q96LQ0 422 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 FOXB1Q99853 325 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 CITED1Q99966 193 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 DECR2Q9NUI1 292 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 NOP53Q9NZM5 478 aaKnown RBP13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF443Q9Y2A4 671 aaPredicted RBP13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 AUP1Q9Y679 476 aa13.84□□□□□ -0.19
NECTIN1-202ENST00000340882 LOC102725191A0A1B0GVB3 256 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 ISPDA4D126 451 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 AIM2O14862 343 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 ALX3O95076 343 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 KNG1P01042 644 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 IGHV4-38-2P0DP08 117 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 GTF2E2P29084 291 aaKnown RBP13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 RELBQ01201 579 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 CAMK2DQ13557 499 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 FBLN7Q53RD9 439 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 ANXA8L1Q5VT79 327 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 C16orf87Q6PH81 154 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 SNX33Q8WV41 574 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 LRR1Q96L50 414 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 SAP30LQ9HAJ7 183 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 NPHS2Q9NP85 383 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 SLC17A7Q9P2U7 560 aa13.83□□□□□ -0.2
NECTIN1-202ENST00000340882 IGKV1D-42A0A075B6H8 117 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 SMIM23A6NLE4 172 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 UBOX5O94941 541 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 UBL3O95164 117 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 LCKP06239 509 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 ZNF12P17014 697 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 LIN52Q52LA3 116 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 RPS26P11Q5JNZ5 115 aaPredicted RBP13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 ASPHD2Q6ICH7 369 aa13.82□□□□□ -0.2
NECTIN1-202ENST00000340882 WDR88Q6ZMY6 472 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms