RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RPL36A-HNRNPH2H7BZ11 118 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 MAST4O15021 2626 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CLOCKO15516 846 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 MAGEA2P43356 314 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 SMIM11AP58511 58 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 FHL1Q13642 323 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 FAM98BQ52LJ0 330 aaKnown RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 HMBOX1Q6NT76 420 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 SEZ6L2Q6UXD5 910 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 OAFQ86UD1 273 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 OR13C2Q8NGS9 318 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 OR6X1Q8NH79 312 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 PLPPR2Q96GM1 343 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 LRR1Q96L50 414 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 ADAD1Q96M93 576 aaKnown RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 TNFRSF13CQ96RJ3 184 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 TRIM15Q9C019 465 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CRLF2Q9HC73 371 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 TMEM5Q9Y2B1 443 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 A0A1W2PRG6 482 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 SH3PXD2BA1X283 911 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 BCL10O95999 233 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 OMPP47874 163 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 SLC9A3P48764 834 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 FLOT2Q14254 428 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 HIKESHIQ53FT3 197 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 ALG10Q5BKT4 473 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 BEX5Q5H9J7 111 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 C17orf78Q8N4C9 275 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 WDR31Q8NA23 367 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 OR4K5Q8NGD3 323 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 OR1K1Q8NGR3 316 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 OR6N1Q8NGY5 312 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 ASB10Q8WXI3 467 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 SLC25A44Q96H78 314 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-201ENST00000340074 ALPK1Q96QP1 1244 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 SLC17A5Q9NRA2 495 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 POMPQ9Y244 141 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 SLC25A15Q9Y619 301 aa13.38□□□□□ -0.27
UBE3B-201ENST00000340074 DSCAMO60469 2012 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 ROS1P08922 2347 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 AQP12BA6NM10 295 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 LIMS1P48059 325 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 CSNK1A1P48729 337 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 DAP3P51398 398 aaKnown RBP13.37□□□□□ -0.27
UBE3B-201ENST00000340074 SH3BGRP55822 239 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-201ENST00000340074 CBX1P83916 185 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 ACKR1Q16570 336 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 AQP12AQ8IXF9 295 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 POP5Q969H6 163 aaKnown RBP13.37□□□□□ -0.27
UBE3B-201ENST00000340074 TMEM54Q969K7 222 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF566Q969W8 418 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 LIME1Q9H400 295 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 PLEKHF2Q9H8W4 249 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 KRCC1Q9NPI7 259 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-201ENST00000340074 B3GAT2Q9NPZ5 323 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 NPAP1Q9NZP6 1156 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 SLC7A8Q9UHI5 535 aa13.37□□□□□ -0.27
UBE3B-201ENST00000340074 A0A096LPE4 126 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 A0A1W2PPZ6 126 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 MCIDASD6RGH6 385 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 KRT36O76013 467 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 PGA4P0DJD7 388 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 PGA3P0DJD8 388 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 RAP2AP10114 183 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 HOXC12P31275 282 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 NR1H2P55055 460 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 CTXN1P60606 82 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 ARF1P84077 181 aaKnown RBP13.36□□□□□ -0.27
UBE3B-201ENST00000340074 RUNX1T1Q06455 604 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 TBRG1Q3YBR2 411 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 ANKRD16Q6P6B7 361 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 SSX8Q7RTT4 187 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 ADGRG5Q8IZF4 528 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 LRRC75AQ8NAA5 344 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 CANT1Q8WVQ1 401 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 BCL2L2Q92843 193 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-201ENST00000340074 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 GPA33Q99795 319 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 C1QTNF6Q9BXI9 259 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 ULBP2Q9BZM5 246 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 TXNIPQ9H3M7 391 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 NELFAQ9H3P2 528 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 ESRP2Q9H6T0 727 aaKnown RBP13.36□□□□□ -0.27
UBE3B-201ENST00000340074 GLTPQ9NZD2 209 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 TMCC3Q9ULS5 477 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 AURKCQ9UQB9 309 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 AMDHD2Q9Y303 409 aa13.36□□□□□ -0.27
UBE3B-201ENST00000340074 LYVE1Q9Y5Y7 322 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms