RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 OR1F2PQ96R84 312 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 NRIP3Q9NQ35 241 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 DUSP22Q9NRW4 184 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ANKRD10Q9NXR5 420 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 FBXL4Q9UKA2 621 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 CACNA1IQ9P0X4 2223 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 FASLGP48023 281 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 ZNF136P52737 540 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 FLI1Q01543 452 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CDK5R1Q15078 307 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 ZNF660Q6AZW8 331 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-201ENST00000338910 WDR88Q6ZMY6 472 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 ZNF619Q8N2I2 560 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 OR52R1Q8NGF1 315 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 C1orf216Q8TAB5 229 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 ST8SIA2Q92186 375 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CTHRC1Q96CG8 243 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 OR14A2Q96R54 314 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 EVA1AQ9H8M9 152 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 MED11Q9P086 117 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 DMDP11532 3685 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CEP192Q8TEP8 1941 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 NDUFB6O95139 128 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 HPP00738 406 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 PLATP00750 562 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 SLC35E2P0CK97 266 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CAPZBP47756 277 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 PTH2RP49190 550 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 ACTC1P68032 377 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 ACTA1P68133 377 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 IL10RAQ13651 578 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 PRTGQ2VWP7 1150 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CDH26Q8IXH8 852 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 METTL27Q8N6F8 245 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-201ENST00000338910 LILRB1Q8NHL6 650 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-201ENST00000338910 PFN4Q8NHR9 129 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 FCAMRQ8WWV6 532 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 PCED1AQ9H1Q7 454 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 HAO2Q9NYQ3 351 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 SLC35A3Q9Y2D2 325 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 CABIN1Q9Y6J0 2220 aa17.12■□□□□ 0.33
PSPC1-201ENST00000338910 FOXS1O43638 330 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 CBX7O95931 251 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 DLX5P56178 289 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 H2BFSP57053 126 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 TP53I3Q53FA7 332 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 MRPL2Q5T653 305 aaKnown RBP17.11■□□□□ 0.33
PSPC1-201ENST00000338910 FCRLBQ6BAA4 426 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 ZAR1Q86SH2 424 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 SLC2A12Q8TD20 617 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 TGM7Q96PF1 710 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 GFI1Q99684 422 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 TTTY10Q9BZA0 68 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 ATPIF1Q9UII2 106 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 MPTX1A8MV57 137 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 SRPX2O60687 465 aaPredicted RBP17.11■□□□□ 0.33
PSPC1-201ENST00000338910 DPP4P27487 766 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 DCTDP32321 178 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 CXCL12P48061 93 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 GFERP55789 205 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 NXPH1P58417 271 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 CSRP2Q16527 193 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 EXOSC6Q5RKV6 272 aaKnown RBP17.11■□□□□ 0.33
PSPC1-201ENST00000338910 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 OR52B4Q8NGK2 314 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 PELI1Q96FA3 418 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 TCTN2Q96GX1 697 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 RBM18Q96H35 190 aaKnown RBP17.11■□□□□ 0.33
PSPC1-201ENST00000338910 STACQ99469 402 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 HPF1Q9NWY4 346 aa17.11■□□□□ 0.33
PSPC1-201ENST00000338910 FXYD6-FXYD2A0A087WZ82 144 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 A0A1B0GTQ1 180 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 FAM74A7A6NL05 159 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 TGFBR3LH3BV60 316 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 HRKO00198 91 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 MAGEB4O15481 346 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-201ENST00000338910 SULT1B1O43704 296 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 AQP8O94778 261 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 RCBTB2O95199 551 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 DBIP07108 87 aaKnown RBP17.1■□□□□ 0.33
PSPC1-201ENST00000338910 THBS1P07996 1170 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 BTG2P78543 158 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 DMWDQ09019 674 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 STX4Q12846 297 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 CRMP1Q14194 572 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 FAM74A3Q4VXF1 159 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 HES5Q5TA89 166 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 NKAIN2Q5VXU1 208 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 SERPINA12Q8IW75 414 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 DEFB123Q8N688 67 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 OR5M1Q8NGP8 315 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 SPACA7Q96KW9 195 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 FXYD6Q9H0Q3 95 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 GMEB2Q9UKD1 530 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 PTP4A3O75365 173 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 KDM4BO94953 1096 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 GYPBP06028 91 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 NID1P14543 1247 aa17.1■□□□□ 0.33
PSPC1-201ENST00000338910 MAP3K8P41279 467 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms