RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PRAMEF4O60810 478 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PPP1R11O60927 126 aaPredicted RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 PSMD10O75832 226 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 MBPP02686 304 aaPredicted RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 CDH12P55289 794 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 BATFQ16520 125 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 LINC00303Q3SY05 128 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 HECTD2Q5U5R9 776 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PRAMEF9Q5VWM5 478 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 OR4K5Q8NGD3 323 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 OR51G2Q8NGK0 314 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SNIP1Q8TAD8 396 aaKnown RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 TMEM234Q8WY98 164 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 GHSRQ92847 366 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 RPUSD4Q96CM3 377 aaKnown RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 MYOZ2Q9NPC6 264 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 ZNF302Q9NR11 478 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 MRPS2Q9Y399 296 aaKnown RBP7.91□□□□□ -1.14
TDP1-201ENST00000335725 RAI2Q9Y5P3 530 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 MMP24Q9Y5R2 645 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 BLACEA4D250 179 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PPP5D1E7EU14 171 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 CTAG2O75638 210 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 SNHG28P0DPA3 235 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 EPCAMP16422 314 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 FAM102BQ5T8I3 360 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 DCAF12L2Q5VW00 463 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 DOK6Q6PKX4 331 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 FRMD1Q8N878 549 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 BMPERQ8N8U9 685 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 FCAMRQ8WWV6 532 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 THAP4Q8WY91 577 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 PGLYRP2Q96PD5 576 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 DOHHQ9BU89 302 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 NIF3L1Q9GZT8 377 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 RLIMQ9NVW2 624 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 ANKRD31Q8N7Z5 1873 aa7.91□□□□□ -1.14
TDP1-201ENST00000335725 ALS2Q96Q42 1657 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 KIAA1551Q9HCM1 1747 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 CD8B2A6NJW9 211 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OR1F1O43749 312 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 WDR1O75083 606 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 FGBP02675 491 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 DCNP07585 359 aaKnown RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 PTNP21246 168 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 CD1CP29017 333 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 WDR5P61964 334 aaKnown RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 H3F3AP84243 136 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 TAF13Q15543 124 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 MST1LQ2TV78 715 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OCIAD2Q56VL3 154 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 CTU1Q7Z7A3 348 aaKnown RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 IZUMO1Q8IYV9 350 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 ZFP41Q8N8Y5 198 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OR4E2Q8NGC2 313 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 ARRDC2Q8TBH0 407 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 SLC7A13Q8TCU3 470 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 BRIX1Q8TDN6 353 aaKnown RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 GPR148Q8TDV2 347 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 YPEL4Q96NS1 127 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 ADGRL4Q9HBW9 690 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 LANCL2Q9NS86 450 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 FOXJ3Q9UPW0 622 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 DHRS7CA6NNS2 312 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 RFXANKO14593 260 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 XRCC3O43542 346 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 STK16O75716 305 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 FCGR3AP08637 254 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 TRGC1P0CF51 173 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OSMP13725 252 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 CELP19835 753 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OTX1P32242 354 aaPredicted RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 TNFSF10P50591 281 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 TMEM33P57088 247 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 ERVFRD-1P60508 538 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 RPS23P62266 143 aaKnown RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 SPANXN4Q5MJ08 99 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OR2G6Q5TZ20 316 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 AWAT2Q6E213 333 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 KIAA0930Q6ICG6 404 aaPredicted RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 UNQ6126/PRO20091Q6UXV3 157 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 SLC36A1Q7Z2H8 476 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 RYBPQ8N488 228 aaPredicted RBP7.9□□□□□ -1.14
TDP1-201ENST00000335725 EXD3Q8N9H8 876 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 OR52B4Q8NGK2 314 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 SECTM1Q8WVN6 248 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 COPS8Q99627 209 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 CMKLR1Q99788 373 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 SLC35A5Q9BS91 424 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 VAX2Q9UIW0 290 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 ANGPT4Q9Y264 503 aa7.9□□□□□ -1.14
TDP1-201ENST00000335725 CACNA1SQ13698 1873 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.9□□□□□ -1.15
TDP1-201ENST00000335725 SUPT3HB4E1H0 165 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 C9orf172C9J069 976 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 ACOT7O00154 380 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 SEPT4O43236 478 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 ZNF749O43361 778 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms