RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
LIMK2-202ENST00000333611 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 VSIG10L2P0DP72 767 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 F3P13726 295 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 SPI1P17947 270 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 S100A7P31151 101 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 BMP8BP34820 402 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 MTNR1BP49286 362 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 COTL1Q14019 142 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 PYY3Q5JQD4 70 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 OR2A2Q6IF42 318 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 TCEAL6Q6IPX3 200 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 BMP8AQ7Z5Y6 402 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 NUP43Q8NFH3 380 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 OR2T33Q8NG76 320 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 OR52L1Q8NGH7 329 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 SUN3Q8TAQ9 357 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 MARS2Q96GW9 593 aaKnown RBP10.89□□□□□ -0.67
LIMK2-202ENST00000333611 OR14A2Q96R54 314 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 LGR4Q9BXB1 951 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 IL17BQ9UHF5 180 aa10.89□□□□□ -0.67
LIMK2-202ENST00000333611 MBTPS2O43462 519 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 EPPINO95925 133 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 RPN2P04844 631 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ATP1B1P05026 303 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 MGMTP16455 207 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 C14orf28Q4W4Y0 310 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 AKR1C8PQ5T2L2 129 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 RPL13AP3Q6NVV1 102 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZNF793Q6ZN11 406 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 MISPQ8IVT2 679 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ARL6IP6Q8N6S5 226 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 SYNPRQ8TBG9 265 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 CXorf40AQ8TE69 158 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 DCUN1D4Q92564 292 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 NKD1Q969G9 470 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 HIST1H2BAQ96A08 127 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 S100A13Q99584 98 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 GPR174Q9BXC1 333 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 FKRPQ9H9S5 495 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 MRPL22Q9NWU5 206 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 USP36Q9P275 1121 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 HEATR5BQ9P2D3 2071 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 A0A1W2PPE2 198 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 IRGMA1A4Y4 181 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 GGT3PA6NGU5 568 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 TBX6O95947 436 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 FAUP35544 74 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZNF616Q08AN1 781 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 PGGHGQ32M88 737 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 DHRS7BQ6IAN0 325 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ACBD4Q8NC06 268 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 MRPL38Q96DV4 380 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 S100A16Q96FQ6 103 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 BSCL2Q96G97 398 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 OR7D2Q96RA2 312 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 PDCD1LG2Q9BQ51 273 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZNF649Q9BS31 505 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 HCAR1Q9BXC0 346 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 VSX1Q9NZR4 365 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 FBXL4Q9UKA2 621 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 OR5H14A6NHG9 310 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZNF726A6NNF4 738 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 BLOC1S5-TXNDC5H3BN57 136 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 CDC42EP2O14613 210 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 RBBP9O75884 186 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 DCNP07585 359 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ID4P47928 161 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 PNLIPRP2P54317 469 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZNF155Q12901 538 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 TSPAN31Q12999 210 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 KLF9Q13886 244 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 AGERQ15109 404 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 RNF151Q2KHN1 245 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ZNF585AQ6P3V2 769 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 KLHDC8AQ8IYD2 350 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ARRDC1Q8N5I2 433 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 SLC16A11Q8NCK7 471 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 OSTF1Q92882 214 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ARRDC3Q96B67 414 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 CNRIP1Q96F85 164 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 SLC41A3Q96GZ6 507 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 SELENOIQ9C0D9 397 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 KRCC1Q9NPI7 259 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 TAS2R5Q9NYW4 299 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 EPHA6Q9UF33 1036 aa10.88□□□□□ -0.67
LIMK2-202ENST00000333611 PUS1Q9Y606 427 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIMK2-202ENST00000333611 ANAPC1Q9H1A4 1944 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 TRAV27A0A087WT01 109 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 CCDC85CA6NKD9 419 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 OR8U8P0C7N1 319 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 ABOP16442 354 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 NDUFV2P19404 249 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 PDX1P52945 283 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 BTN3A2P78410 334 aa10.87□□□□□ -0.67
LIMK2-202ENST00000333611 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms