RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 NOX4Q9NPH5 578 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 PAPPAQ13219 1627 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 A0A1W2PNR3 127 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 ZNF780AO75290 641 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 ETHE1O95571 254 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 KIAA1024LP59773 190 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SMAD4Q13485 552 aaKnown RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 ZNF684Q5T5D7 378 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SSX9Q7RTT3 188 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 DCXRQ7Z4W1 244 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 MAFAQ8NHW3 353 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 PCNPQ8WW12 178 aaKnown RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 LRFN1Q9P244 771 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 COA3Q9Y2R0 106 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 PCBD1P61457 104 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SLC35A1P78382 337 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SLX4IPQ5VYV7 408 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 C6orf15Q6UXA7 325 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 NPSR1Q6W5P4 371 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 RNF113BQ8IZP6 322 aaKnown RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 POC1BQ8TC44 478 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 LGALS14Q8TCE9 139 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 DVL3Q92997 716 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 LURAP1Q96LR2 239 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 NOX3Q9HBY0 568 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 HMGN4O00479 90 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SULT1B1O43704 296 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 CLDN6P56747 220 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 AGAP7PQ5VUJ5 663 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 AGAP6Q5VW22 663 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 ZNF679Q8IYX0 411 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 ZNF808Q8N4W9 903 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 MUL1Q969V5 352 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SLAMF9Q96A28 289 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 MALSU1Q96EH3 234 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 AGAP4Q96P64 663 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 PIGQQ9BRB3 760 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 CACNA1CQ13936 2221 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 GFYI3L273 518 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 SRFP11831 508 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 ATP1B3P54709 279 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 HYAL1Q12794 435 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 CMPK2Q5EBM0 449 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 DLEU7Q6UYE1 221 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 C3P1Q6ZMU1 363 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 Q6ZNB5 142 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 ZNF436Q9C0F3 470 aaPredicted RBP9.37□□□□□ -0.91
CHD3-201ENST00000330494 WASH6PQ9NQA3 447 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 NUBP2Q9Y5Y2 271 aa9.37□□□□□ -0.91
CHD3-201ENST00000330494 NINQ8N4C6 2090 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 PLRG1O43660 514 aaKnown RBP9.36□□□□□ -0.91
CHD3-201ENST00000330494 ABHD16AO95870 558 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 CXCL10P02778 98 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 ZNF136P52737 540 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 SF3A2Q15428 464 aaKnown RBP9.36□□□□□ -0.91
CHD3-201ENST00000330494 AGBL4Q5VU57 503 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 METTL11BQ5VVY1 283 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 BCORP1Q8N888 145 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 TERB2Q8NHR7 220 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 GIMAP1Q8WWP7 306 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 ASB17Q8WXJ9 295 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 WDR76Q9H967 626 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 DAPP1Q9UN19 280 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 SNRNP70P08621 437 aaKnown RBP9.36□□□□□ -0.91
CHD3-201ENST00000330494 CR2P20023 1033 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 RAB4AP20338 218 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 RAB6AP20340 208 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 M6PRP20645 277 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 MMP11P24347 488 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 PRKAR1BP31321 381 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 MEP1BQ16820 701 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 H1FXQ92522 213 aaKnown RBP9.36□□□□□ -0.91
CHD3-201ENST00000330494 OR51J1Q9H342 316 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 A0A1B0GTL3 188 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 ANKRD61A6NGH8 418 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 PMP2P02689 132 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 CSF1P09603 554 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 IL2RGP31785 369 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 EIF2DP41214 584 aaKnown RBP9.36□□□□□ -0.91
CHD3-201ENST00000330494 OR8B8Q15620 311 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 ZNF425Q6IV72 752 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 BPIFB2Q8N4F0 458 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 OR6F1Q8NGZ6 308 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 CD300LBA8K4G0 201 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 MAGEB4O15481 346 aaPredicted RBP9.36□□□□□ -0.91
CHD3-201ENST00000330494 ICOSLGO75144 302 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 TEAD1P28347 426 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 SFRP5Q5T4F7 317 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 ABHD4Q8TB40 342 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 TMEM106AQ96A25 262 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 GCM1Q9NP62 436 aa9.36□□□□□ -0.91
CHD3-201ENST00000330494 PCM1Q15154 2024 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms