RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ARIH2OSQ8N7S6 290 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR10H4Q8NGA5 316 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR5J2Q8NH18 312 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 SPRYD4Q8WW59 207 aaPredicted RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 ARL5BQ96KC2 179 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 FRMD6Q96NE9 622 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TSPAN32Q96QS1 320 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TIMP4Q99727 224 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR2B2Q9GZK3 357 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 C11orf98E9PRG8 122 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 TMCC2O75069 709 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 CCL3P10147 92 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 IL11P20809 199 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 IL10RAQ13651 578 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 SGCBQ16585 318 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 NDUFA5Q16718 116 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 SLC25A53Q5H9E4 307 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 SLC6A19Q695T7 634 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 C5orf46Q6UWT4 87 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 MARCH9Q86YJ5 346 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 RDH10Q8IZV5 341 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 ATP6V1C2Q8NEY4 427 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR52N1Q8NH53 320 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 POC1BQ8TC44 478 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 SMPDL3BQ92485 455 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 GPR87Q9BY21 358 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 GRHPRQ9UBQ7 328 aa18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZNF346Q9UL40 294 aaKnown RBP18.28■□□□□ 0.52
RIPPLY3-201ENST00000329553 SPAARA0A1B0GVQ0 90 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 DAPL1A0PJW8 107 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 FTCDNL1E5RQL4 147 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR2T1O43869 369 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 DXOO77932 396 aaKnown RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 SPI1P17947 270 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 TCEA1P23193 301 aaKnown RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 FOXK1P85037 733 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 CHAF1BQ13112 559 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 TMEM81Q6P7N7 255 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZNF322Q6U7Q0 402 aaPredicted RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 FADS6Q8N9I5 356 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 MRGPRX4Q96LA9 322 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 SNX18Q96RF0 628 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 COQ7Q99807 217 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 SOSTQ9BQB4 213 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 C11orf54Q9H0W9 315 aaPredicted RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 ISG20L2Q9H9L3 353 aaKnown RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 PROK2Q9HC23 129 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 SH2D2AQ9NP31 389 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 MRPS18BQ9Y676 258 aaKnown RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 ALPK2Q86TB3 2170 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 FREM2Q5SZK8 3169 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 LOC101059948A0A1B0GTJ6 334 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 LINC00854A0A1B0GVQ3 168 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 HMX3A6NHT5 357 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 C21orf140B9A014 251 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 RAD1O60671 282 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 PON3Q15166 354 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 B3GNTL1Q67FW5 361 aaPredicted RBP18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 JAZF1Q86VZ6 243 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZFP41Q8N8Y5 198 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 PAQR8Q8TEZ7 354 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 ALG8Q9BVK2 526 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 MMP28Q9H239 520 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 HPF1Q9NWY4 346 aa18.27■□□□□ 0.52
RIPPLY3-201ENST00000329553 SMIM30A4D0T7 59 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 ZNF208O43345 1280 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 AHCYP23526 432 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 DIO1P49895 249 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 PPP3R1P63098 170 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 GALEQ14376 348 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 MESTQ5EB52 335 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 EMC4Q5J8M3 183 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 OR4K17Q8NGC6 315 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 ZNF417Q8TAU3 575 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 TSSK2Q96PF2 358 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 ZNF587Q96SQ5 575 aaPredicted RBP18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 ANGPTL4Q9BY76 406 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 NDEL1Q9GZM8 345 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 RPRD1BQ9NQG5 326 aaKnown RBP18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 PLPP3O14495 311 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 PLA2G10O15496 165 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 FTH1P19P0C7X4 201 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 HCCSP53701 268 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 CAV3P56539 151 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 LGALS3BPQ08380 585 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 POU4F2Q12837 409 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 PYDC2Q56P42 97 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 SLC22A10Q63ZE4 541 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 H3F3CQ6NXT2 135 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 DND1Q8IYX4 353 aaKnown RBP18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 OR5M1Q8NGP8 315 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 NTNG2Q96CW9 530 aa18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 DCLRE1CQ96SD1 692 aaKnown RBP18.26■□□□□ 0.51
RIPPLY3-201ENST00000329553 RNF13O43567 381 aa18.25■□□□□ 0.51
RIPPLY3-201ENST00000329553 HLA-DQB1P01920 261 aa18.25■□□□□ 0.51
RIPPLY3-201ENST00000329553 SERPINA7P05543 415 aa18.25■□□□□ 0.51
RIPPLY3-201ENST00000329553 ZNF85Q03923 595 aa18.25■□□□□ 0.51
RIPPLY3-201ENST00000329553 GGTLC2Q14390 218 aa18.25■□□□□ 0.51
RIPPLY3-201ENST00000329553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.25■□□□□ 0.51
RIPPLY3-201ENST00000329553 GPR139Q6DWJ6 353 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms