RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MRPL19P49406 292 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 NDUFA6P56556 154 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 MANEAQ5SRI9 462 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 C1orf189Q5VU69 101 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 EIF5AL1Q6IS14 154 aaKnown RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 KLHL24Q6TFL4 600 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 PRR22Q8IZ63 422 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 MUC20Q8N307 709 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF565Q8N9K5 539 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 BVESQ8NE79 360 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 OR2A12Q8NGT7 310 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 FIBINQ8TAL6 211 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 TOMM40LQ969M1 308 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 TBC1D20Q96BZ9 403 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 HAVCR1Q96D42 359 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SCMH1Q96GD3 660 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 Q96M85 177 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 PHB2Q99623 299 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 TCEAL2Q9H3H9 227 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 DPEP2Q9H4A9 486 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 FGF20Q9NP95 211 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-201ENST00000317716 SPHK1Q9NYA1 384 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 KIF25Q9UIL4 384 aa6.93□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM235A6NFC5 223 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 H3BNC9 293 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 GABARAPH6UMI1 98 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ITGA5P08648 1049 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 HOXD4P09016 255 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 TPT1P13693 172 aaKnown RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 CEBPBP17676 345 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ERV3-1Q14264 604 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 THSD4Q6ZMP0 1018 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF836Q6ZNA1 936 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SSX9Q7RTT3 188 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 GPAT4Q86UL3 456 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 LINC00518Q8N0U6 118 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 NUBPLQ8TB37 319 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 NEK7Q8TDX7 302 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 CA5BP1Q8WTZ4 195 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SMIM4Q8WVI0 70 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 TTC9Q92623 222 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ST6GALNAC5Q9BVH7 336 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 MS4A8Q9BY19 250 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 C6orf106Q9H6K1 298 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 RETREG1Q9H6L5 497 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 PNO1Q9NRX1 252 aaKnown RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 HIF3AQ9Y2N7 669 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF281Q9Y2X9 895 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SCN2AQ99250 2005 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 TSPAN11A1L157 253 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 EFCAB7A8K855 629 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 FZD6O60353 706 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 MPIG6BO95866 241 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 CD160O95971 181 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 OPN1LWP04000 364 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 CSF1P09603 554 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 TMIGD3P0DMS9 266 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 DRD2P14416 443 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 HOXB3P14651 431 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 HIST1H1CP16403 213 aaKnown RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 FPR3P25089 353 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 NFYBP25208 207 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 BDKRB2P30411 391 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 AKT2P31751 481 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 MEOX2P50222 304 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ACTBP60709 375 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ACTG1P63261 375 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 PDE7AQ13946 482 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 OR4S1Q8NGB4 309 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 OR52H1Q8NGJ2 320 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 FAM174AQ8TBP5 190 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 PEX11GQ96HA9 241 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 C10orf90Q96M02 699 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SPACA5Q96QH8 159 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 OR8D2Q9GZM6 311 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 MRPL22Q9NWU5 206 aaKnown RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF230Q9UIE0 474 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 NPFFR2Q9Y5X5 522 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 A0A1W2PR48 441 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 C2orf74A8MZ97 194 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 WRBO00258 174 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SLCO2B1O94956 709 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 TGM6O95932 706 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SULT1A3P0DMM9 295 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 SULT1A4P0DMN0 295 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 OR13C7P0DN81 318 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 PRLHRP49683 370 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 P2RX1P51575 399 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 GUCA2BQ16661 112 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 DUSP5Q16690 384 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 TRMT12Q53H54 448 aaKnown RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 LIPNQ5VXI9 398 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 LRRC69Q6ZNQ3 347 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 COX15Q7KZN9 410 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ABHD13Q7L211 337 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF679Q8IYX0 411 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 KDM8Q8N371 416 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 LILRB1Q8NHL6 650 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-201ENST00000317716 ELP5Q8TE02 316 aa6.92□□□□□ -1.3
CDHR3-201ENST00000317716 C2orf15Q8WU43 125 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms