RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 ZNF136P52737 540 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 MEP1BQ16820 701 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM255AQ5JRV8 349 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM205Q6UW68 189 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 STAC2Q6ZMT1 411 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 OR4C3Q8NH37 302 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 OR51Q1Q8NH59 317 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PITHD1Q9GZP4 211 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 ZMIZ1Q9ULJ6 1067 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 C19orf53Q9UNZ5 99 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 C2orf74A8MZ97 194 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 F8W036 122 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 MOSPD3O75425 235 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PPM1BO75688 479 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 LPLP06858 475 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 IFNGR1P15260 489 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PPP3CBP16298 524 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PVALBP20472 110 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 IL32P24001 234 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 BLOC1S1P78537 153 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 SLC25A30Q5SVS4 291 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 RNLSQ5VYX0 342 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 AICDAQ9GZX7 198 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 MDC1Q14676 2089 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 ZNF736B4DX44 427 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 ADH1BP00325 375 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 RRASP10301 218 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 IGFALSP35858 605 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PPP2CBP62714 309 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PPP2CAP67775 309 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 AIMP2Q13155 320 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 STEAP1BQ6NZ63 245 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 SPAG16Q8N0X2 631 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 NPRL2Q8WTW4 380 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 LRRC46Q96FV0 321 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 AIFM2Q9BRQ8 373 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 OR5V1Q9UGF6 321 aa13.11□□□□□ -0.31
CSNK1D-202ENST00000314028 SCGB1D2O95969 90 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 IGF2P01344 180 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 S1PR1P21453 382 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 DRD3P35462 400 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 PPP1CAP62136 330 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 BTG2P78543 158 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 TDGQ13569 410 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 GLYATL3Q5SZD4 288 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 GPR137Q96N19 417 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SORCS2Q96PQ0 1159 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 TIMM29Q9BSF4 260 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 MTIF3Q9H2K0 278 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 C7orf66A4D0T2 115 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 GPRIN2O60269 458 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 ARRB1P49407 418 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 BDH1Q02338 343 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 AGBL4Q5VU57 503 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 DMKNQ6E0U4 476 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 ZFP82Q8N141 532 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SLC38A3Q99624 504 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SVILO95425 2214 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 MPDZO75970 2070 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM235A6NFC5 223 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 HRKO00198 91 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 PRAMEF2O60811 474 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SFTPBP07988 381 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 RAB40ALP0C0E4 278 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 GIMD1P0DJR0 217 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 RNH1P13489 461 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 GAS1P54826 345 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 DYRK1AQ13627 763 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 MLC1Q15049 377 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 FBXO42Q6P3S6 717 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 OR4D10Q8NGI6 311 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 OR51A4Q8NGJ6 313 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 RAB40AQ8WXH6 277 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 PPP1R14AQ96A00 147 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 SPACA5Q96QH8 159 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 INTS14Q96SY0 518 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 POFUT1Q9H488 388 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
CSNK1D-202ENST00000314028 CXCL2P19875 107 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 MARCH3Q86UD3 253 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 LINC00346Q8IVM7 164 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 GTPBP8Q8N3Z3 284 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 RCBTB1Q8NDN9 531 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms