RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SGK494L7N484 410 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 RPS17P08708 135 aaKnown RBP14.38□□□□□ -0.11
HCFC1-201ENST00000310441 FCGR2AP12318 317 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 DCAF12Q5T6F0 453 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SFXN4Q6P4A7 337 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 MBOAT2Q6ZWT7 520 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 OR5K2Q8NHB8 316 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 ARSGQ96EG1 525 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 REEP6Q96HR9 211 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 SLC35E1Q96K37 410 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 TRAV27A0A087WT01 109 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 MAKP20794 623 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 PMPCAQ10713 525 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 NXNL2Q5VZ03 156 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 IGSF8Q969P0 613 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 C12orf10Q9HB07 376 aa14.38□□□□□ -0.11
HCFC1-201ENST00000310441 PHF1O43189 567 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 PLRG1O43660 514 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 C1orf105O95561 183 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 HTR1FP30939 366 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 TNFSF8P32971 234 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 RPS23P62266 143 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 ZNF620Q6ZNG0 422 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 BORCS6Q96GS4 357 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 TIMD4Q96H15 378 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 DHRS9Q9BPW9 319 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 UTP23Q9BRU9 249 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 WDR83Q9BRX9 315 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 A0A0B4J2A0 478 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 MT-ATP6P00846 226 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 SSTR2P30874 369 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 ESPNLQ6ZVH7 1005 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 MARCH4Q9P2E8 410 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 SHPKQ9UHJ6 478 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 COL2A1P02458 1487 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 TOGARAM1Q9Y4F4 1720 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 FAM171A2A8MVW0 826 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 HCCSP53701 268 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 WNT7BP56706 349 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 MRPL2Q5T653 305 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 KCMF1Q9P0J7 381 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 KDM4EB2RXH2 506 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 ACKR3P25106 362 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 LRRC18Q8N456 261 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 OR5H6Q8NGV6 325 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 NEIL2Q969S2 332 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 RBPJLQ9UBG7 517 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 STRAPQ9Y3F4 350 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 PIAS3Q9Y6X2 628 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 NCBP2LA6PVI3 153 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 TRAPPC2P0DI81 140 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 TRAPPC2BP0DI82 140 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 CALCRP30988 508 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 NLGN4YQ8NFZ3 816 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 SCARB1Q8WTV0 552 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 IL17FQ96PD4 163 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 OR7D2Q96RA2 312 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 HEYLQ9NQ87 328 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 LIN7CQ9NUP9 197 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 C5P01031 1676 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 MBTPS1Q14703 1052 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 Q6ZSR6 202 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 AP1G1O43747 822 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 OR2F2O95006 317 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 SRMP19623 302 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 PRLHRP49683 370 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 OR2F1Q13607 317 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 CDHR3Q6ZTQ4 885 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 LGI3Q8N145 548 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 OR52R1Q8NGF1 315 aa14.37□□□□□ -0.11
HCFC1-201ENST00000310441 DNMT3BQ9UBC3 853 aaKnown RBP14.37□□□□□ -0.11
HCFC1-201ENST00000310441 NUPL2O15504 423 aaKnown RBP14.36□□□□□ -0.11
HCFC1-201ENST00000310441 HMGN2P05204 90 aaKnown RBP14.36□□□□□ -0.11
HCFC1-201ENST00000310441 USP53Q70EK8 1073 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GGHQ92820 318 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 ALG12Q9BV10 488 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GPR75O95800 540 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 TGM1P22735 817 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 PSMB10P40306 273 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 BTG1P62324 171 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 SLC7A9P82251 487 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 SYT6Q5T7P8 510 aaPredicted RBP14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GSTO2Q9H4Y5 243 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 DHRS4L1P0CG22 281 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 SDC1P18827 310 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GDNFP39905 211 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GJC3Q8NFK1 279 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GPR45Q9Y5Y3 372 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 TMEM127O75204 238 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 CYC1P08574 325 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 SQSTM1Q13501 440 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GPR26Q8NDV2 337 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 APH1BQ8WW43 257 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 GPR62Q9BZJ7 368 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 ALPLP05186 524 aa14.36□□□□□ -0.11
HCFC1-201ENST00000310441 ADRA2CP18825 462 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms