RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CMC2Q9NRP2 79 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 HAO2Q9NYQ3 351 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 AKAP7Q9P0M2 348 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC7A7Q9UM01 511 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 A0A1B0GUH1 482 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZC3H12DA2A288 527 aaKnown RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 URADA6NGE7 173 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 DUXAA6NLW8 204 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRR23D1E9PI22 279 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 LAMTOR5O43504 91 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 RCBTB2O95199 551 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 AGR2O95994 175 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 HPXP02790 462 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 SBK2P0C263 348 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRR23D2P0DMB1 279 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRF1P14222 555 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ATF1P18846 271 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 SELENOPP49908 381 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 NR0B1P51843 470 aaKnown RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ACTC1P68032 377 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ACTA1P68133 377 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 TNFRSF17Q02223 184 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 CFHR1Q03591 330 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF85Q03923 595 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR7E24Q6IFN5 339 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 OVCH1Q7RTY7 1134 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 MAML2Q8IZL2 1156 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 C12orf45Q8N5I9 185 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 C4orf36Q96KX1 117 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZFP3Q96NJ6 502 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 CD180Q99467 661 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRSS27Q9BQR3 290 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 TINAGL1Q9GZM7 467 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 METTL17Q9H7H0 456 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 SIDT1Q9NXL6 827 aaKnown RBP9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 ST6GALNAC2Q9UJ37 374 aa9.43□□□□□ -0.9
APOBEC3F-201ENST00000308521 OGG1O15527 345 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FGF17O60258 216 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 REM1O75628 298 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 CFIP05156 583 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 CD1AP06126 327 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 BMP7P18075 431 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC2A5P22732 501 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 PDX1P52945 283 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 TRMT12Q53H54 448 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 EIPR1Q53HC9 387 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 UBE2NLQ5JXB2 153 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FRRS1Q6ZNA5 592 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 PDZD9Q8IXQ8 264 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 EID2Q8N6I1 236 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 C17orf47Q8NEP4 570 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 BEST4Q8NFU0 473 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC35A4Q96G79 324 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF285Q96NJ3 590 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ELF4Q99607 663 aaPredicted RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 HCAR1Q9BXC0 346 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ADGRL4Q9HBW9 690 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 CAPN10Q9HC96 672 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 KLHL1Q9NR64 748 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 NTMQ9P121 344 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 MYEF2Q9P2K5 600 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FBXL3Q9UKT7 428 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC22A7Q9Y694 548 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 TRAPPC13A5PLN9 417 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 CDHR4A6H8M9 788 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 J3QLW9 94 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FLRT2O43155 660 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 GALR3O60755 368 aaPredicted RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM127O75204 238 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ARL6IP5O75915 188 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 IGHV2-70P01814 119 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FCER2P06734 321 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FBP1P09467 338 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SNRPBP14678 240 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF19P17023 458 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 PSMB1P20618 241 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 NT5EP21589 574 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 GDNFP39905 211 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 TSFMP43897 325 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 CCR9P51686 369 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF136P52737 540 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 TSPAN5P62079 268 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 EEF1A1P68104 462 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FOXK2Q01167 660 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SIGLEC14Q08ET2 396 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 POU4F2Q12837 409 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 EEF1A1P5Q5VTE0 462 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 OGFOD3Q6PK18 319 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM111BQ6SJ93 734 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 C17orf82Q86X59 251 aaPredicted RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR6V1Q8N148 313 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR7G2Q8NG99 324 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR4K14Q8NGD5 310 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ADAMTS15Q8TE58 950 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 THAP4Q8WY91 577 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 GHSRQ92847 366 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 LRRC46Q96FV0 321 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SFXN2Q96NB2 322 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 DPH1Q9BZG8 443 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 SMOC1Q9H4F8 434 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms