RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RUNX3Q13761 415 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 TMEM184AQ6ZMB5 413 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 NANOGP1Q8N7R0 232 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 OR52H1Q8NGJ2 320 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 OR52E1Q8NGJ3 308 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 CMTM3Q96MX0 182 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 SGIP1Q9BQI5 828 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 GSX2Q9BZM3 304 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 PRSS16Q9NQE7 514 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 J3QR89 54 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 EIF1BO60739 113 aaKnown RBP7.08□□□□□ -1.28
SF3B3-201ENST00000302516 OR2C1O95371 312 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 PRSS56P0CW18 603 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 FOXK2Q01167 660 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 YOD1Q5VVQ6 348 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-201ENST00000302516 VRK2Q86Y07 508 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 RTP3Q9BQQ7 232 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 LYRM4Q9HD34 91 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 MYEF2Q9P2K5 600 aaKnown RBP7.08□□□□□ -1.28
SF3B3-201ENST00000302516 ANKRD34BA5PLL1 514 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 PTGER4P35408 488 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 PKDCCQ504Y2 493 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 LCN10Q6JVE6 187 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 HEPHL1Q6MZM0 1159 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 TCTE3Q8IZS6 198 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 BOLLQ8N9W6 283 aaKnown RBP7.08□□□□□ -1.28
SF3B3-201ENST00000302516 CHST14Q8NCH0 376 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 ABHD6Q9BV23 337 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 NAA50Q9GZZ1 169 aaKnown RBP7.08□□□□□ -1.28
SF3B3-201ENST00000302516 SLC6A17Q9H1V8 727 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 CYB5R1Q9UHQ9 305 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 HS3ST2Q9Y278 367 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 ANGPTL7O43827 346 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 MBP02144 154 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 SLC10A1Q14973 349 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 XKR7Q5GH72 579 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 HSD11B1LQ7Z5J1 315 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 CATSPERDQ86XM0 798 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 CELF2-AS1Q8N7Q2 184 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 OLIG1Q8TAK6 271 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-201ENST00000302516 SLC22A12Q96S37 553 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 CRB3Q9BUF7 120 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 APOOQ9BUR5 198 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 ACKR4Q9NPB9 350 aa7.08□□□□□ -1.28
SF3B3-201ENST00000302516 FAM171A2A8MVW0 826 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 GLCEO94923 617 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 CHRM2P08172 466 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 CTSAP10619 480 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 TGM1P22735 817 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 DPP4P27487 766 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 IL2RGP31785 369 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 P2RY2P41231 377 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 MTCP1P56278 107 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 AKR1C1Q04828 323 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SMN1Q16637 294 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 IL20RBQ6UXL0 311 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ARFGAP1Q8N6T3 406 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 COL16A1Q07092 1604 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 LRP5O75197 1615 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZFAND5O76080 213 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SLCO2B1O94956 709 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 M6PRP20645 277 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 GJA5P36382 358 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 PGGT1BP53609 377 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 RTP2Q5QGT7 225 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ACOT7LQ6ZUV0 252 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SCD5Q86SK9 330 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 LSMEM2Q8N112 164 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 APH1BQ8WW43 257 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 HDAC8Q9BY41 377 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 PURGQ9UJV8 347 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 KIR2DS1A0A191URI9 304 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 A6NCN8 305 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 GPX2P18283 190 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF93P35789 620 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 KIR2DS4P43632 304 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 KIR2DS1Q14954 304 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FCN2Q15485 313 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 OR7E24Q6IFN5 339 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 LGI3Q8N145 548 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 COMMD1Q8N668 190 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 CORO2AQ92828 525 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 C14orf79Q96F83 325 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 NDRG4Q9ULP0 352 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 MMACHCQ9Y4U1 282 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 TRIP12Q14669 1992 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SERINC4A6NH21 518 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 PRDX1Q06830 199 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 BAXQ07812 192 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 DOC2BQ14184 412 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 MBTPS1Q14703 1052 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 NR0B2Q15466 257 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 OR2G6Q5TZ20 316 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 DHRS4L2Q6PKH6 230 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 TMEM64Q6YI46 380 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF836Q6ZNA1 936 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 Q6ZTK2 550 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 GDF7Q7Z4P5 450 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 CADM3Q8N126 398 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms