RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FGF9P31371 208 aaPredicted RBP12.87□□□□□ -0.35
SDC2-201ENST00000302190 TPMTP51580 245 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 ARHGAP11BQ3KRB8 267 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 KIAA0907Q7Z7F0 614 aaPredicted RBP12.87□□□□□ -0.35
SDC2-201ENST00000302190 GPR148Q8TDV2 347 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 PMM1Q92871 262 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 SFXN2Q96NB2 322 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 PCDHB16Q9NRJ7 776 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 HPF1Q9NWY4 346 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 RAB3DO95716 219 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 AK1P00568 194 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 FRKP42685 505 aaPredicted RBP12.87□□□□□ -0.35
SDC2-201ENST00000302190 LIMS1P48059 325 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 RPL22L1Q6P5R6 122 aaKnown RBP12.87□□□□□ -0.35
SDC2-201ENST00000302190 SLC29A4Q7RTT9 530 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 PM20D2Q8IYS1 436 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
SDC2-201ENST00000302190 CYSLTR2Q9NS75 346 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 ABRACLQ9P1F3 81 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 EPHA6Q9UF33 1036 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 ZNF175Q9Y473 711 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 OR14I1A6ND48 311 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 CHP2O43745 196 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 ZNF432O94892 652 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 ZNF35P13682 527 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 OR3A2P47893 321 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 S100A10P60903 97 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 RAB30Q15771 203 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 INO80EQ8NBZ0 244 aaPredicted RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 ADAMTS14Q8WXS8 1223 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 HSD17B8Q92506 261 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 PELI1Q96FA3 418 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 TEX101Q9BY14 249 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 PDE7BQ9NP56 450 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 SIGLEC7Q9Y286 467 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 A0A1B0GV50 99 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 SPINT1O43278 529 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 HCKP08631 526 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 EPXP11678 715 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 CDK2P24941 298 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 AKR1C2P52895 323 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 AKR1C1Q04828 323 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 PUDPQ08623 228 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 DUSP8Q13202 625 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 MEP1BQ16820 701 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 SIGLEC11Q96RL6 698 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 MNTQ99583 582 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 TREM1Q9NP99 234 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 ACOT7O00154 380 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 LGALS8O00214 317 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 CCSO14618 274 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 CELA2BP08218 269 aaPredicted RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 RAB11BQ15907 218 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 BTN2A1Q7KYR7 527 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 ZNF584Q8IVC4 421 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 OR13C3Q8NGS6 347 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 CPNE2Q96FN4 548 aaPredicted RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 INTS14Q96SY0 518 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 OR10A5Q9H207 317 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 METTL8Q9H825 291 aaKnown RBP12.86□□□□□ -0.35
SDC2-201ENST00000302190 PRODH2Q9UF12 536 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 HRH3Q9Y5N1 445 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
SDC2-201ENST00000302190 IGHV3-20A0A0C4DH32 117 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 SERINC4A6NH21 518 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 GMDSO60547 372 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 RECKO95980 971 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 SPI1P17947 270 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 GUCA2AQ02747 115 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 ZNF615Q8N8J6 731 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 OR51S1Q8NGJ8 323 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
SDC2-201ENST00000302190 SLC25A44Q96H78 314 aaPredicted RBP12.85□□□□□ -0.35
SDC2-201ENST00000302190 KCNK15Q9H427 330 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 SLC22A13Q9Y226 551 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 ZNF337Q9Y3M9 751 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 ATG2AQ2TAZ0 1938 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 TBX6O95947 436 aaPredicted RBP12.85□□□□□ -0.35
SDC2-201ENST00000302190 SCGB1D2O95969 90 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 DCNP07585 359 aaKnown RBP12.85□□□□□ -0.35
SDC2-201ENST00000302190 ZNF20P17024 532 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 ZNF28P17035 718 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 SLC2A5P22732 501 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 HSD11B1P28845 292 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 LSSP48449 732 aa12.85□□□□□ -0.35
SDC2-201ENST00000302190 AANATQ16613 207 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms