RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 OVCH2Q7RTZ1 564 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 CMTM4Q8IZR5 234 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 BVESQ8NE79 360 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 DNAAF1Q8NEP3 725 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 C1orf216Q8TAB5 229 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 MRPS24Q96EL2 167 aaKnown RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 FKRPQ9H9S5 495 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 Q9N2J8 555 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 NCDNQ9UBB6 729 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 CTSFQ9UBX1 484 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ZNF69Q9UC07 566 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ST6GALNAC2Q9UJ37 374 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 A0A0J9YY10 115 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 RAD1O60671 282 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 IGF2P01344 180 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 TNFP01375 233 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 AKT2P31751 481 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 TNFRSF4P43489 277 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 TRAM1Q15629 374 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 C21orf62-AS1Q17RA5 79 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 C11orf88Q6PI97 169 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 PRSS58Q8IYP2 241 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 PHOSPHO1Q8TCT1 267 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 SMIM19Q96E16 107 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 MMABQ96EY8 250 aaPredicted RBP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 UBL7Q96S82 380 aaPredicted RBP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 NKX3-1Q99801 234 aaPredicted RBP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 CA10Q9NS85 328 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 MGAT4CQ9UBM8 478 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 EPOPA6NHQ4 379 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 A8MXK9 166 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 DISC1C4P0D8 188 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 EIF3GO75821 320 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 UBL3O95164 117 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 NHLRC1Q6VVB1 395 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 SCARF2Q96GP6 870 aaPredicted RBP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 DGAT2Q96PD7 388 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
CTDP1-202ENST00000299543 GINS4Q9BRT9 223 aa12.28□□□□□ -0.44
CTDP1-202ENST00000299543 ELOA3DA6NLF2 546 aaPredicted RBP12.27□□□□□ -0.44
CTDP1-202ENST00000299543 GPR31O00270 319 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 TXNL1O43396 289 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 TNFSF14O43557 240 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 NKX2-2O95096 273 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 AK1P00568 194 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 RLN2P04090 185 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 ACAA1P09110 424 aaPredicted RBP12.27□□□□□ -0.44
CTDP1-202ENST00000299543 OR2T7P0C7T2 308 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 SLC35E2P0CK97 266 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 SRMP19623 302 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 GALP22466 123 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 SLC2A5P22732 501 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 PITPNAQ00169 270 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 SGCAQ16586 387 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 ELOA3BQ3SY89 546 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 CORO6Q6QEF8 472 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 PRR22Q8IZ63 422 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 ELOA3Q8NG57 546 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 OR2T27Q8NH04 317 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 SLC25A28Q96A46 364 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 ADAD1Q96M93 576 aaKnown RBP12.27□□□□□ -0.44
CTDP1-202ENST00000299543 SLC38A3Q99624 504 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 ING1Q9UK53 422 aaPredicted RBP12.27□□□□□ -0.44
CTDP1-202ENST00000299543 RP1P56715 2156 aa12.27□□□□□ -0.44
CTDP1-202ENST00000299543 APBB3O95704 486 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 BTG1P62324 171 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 DLX2Q07687 328 aaPredicted RBP12.27□□□□□ -0.45
CTDP1-202ENST00000299543 JAZF1Q86VZ6 243 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 ELF4Q99607 663 aaPredicted RBP12.27□□□□□ -0.45
CTDP1-202ENST00000299543 NKX2-4Q9H2Z4 354 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 PRTFDC1Q9NRG1 225 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 POMT2Q9UKY4 750 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 NPFFR2Q9Y5X5 522 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 NUBP2Q9Y5Y2 271 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 DENND4AQ7Z401 1863 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 ASXL3Q9C0F0 2248 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 NUDT14O95848 222 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 MAS1P04201 325 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 SPI1P17947 270 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 GRK6P43250 576 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 PXKQ7Z7A4 578 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 MCATQ8IVS2 390 aaKnown RBP12.27□□□□□ -0.45
CTDP1-202ENST00000299543 OR52I2Q8NH67 350 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 PRMT8Q9NR22 394 aaPredicted RBP12.27□□□□□ -0.45
CTDP1-202ENST00000299543 C2orf42Q9NWW7 574 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 SOHLH2Q9NX45 425 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 PIAS3Q9Y6X2 628 aa12.27□□□□□ -0.45
CTDP1-202ENST00000299543 TGFBR3LH3BV60 316 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 FMO6PO60774 539 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 GPANK1O95872 356 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 UCHL1P09936 223 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 FBXO45P0C2W1 286 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 RAB38P57729 211 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms