RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FAM81AQ8TBF8 368 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 SLC38A2Q96QD8 506 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 FKRPQ9H9S5 495 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 C20orf141Q9NUB4 165 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 TBC1D23Q9NUY8 699 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 MBD3L4A6NDZ8 208 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-201ENST00000298966 MBD3L3A6NE82 208 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-201ENST00000298966 MBD3L5A6NJ08 208 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-201ENST00000298966 KPNA4O00629 521 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-201ENST00000298966 NPIPB7O75200 414 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 POU1F1P28069 291 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 PRPS1P60891 318 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 ZNF74Q16587 644 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 ZBED5Q49AG3 693 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 OR5M10Q6IEU7 315 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 LAIR2Q6ISS4 152 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 SMARCD3Q6STE5 483 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 OAFQ86UD1 273 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 ENTHD1Q8IYW4 607 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 OR2T33Q8NG76 320 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 RHOXF1Q8NHV9 184 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 MBD3L2Q8NHZ7 208 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-201ENST00000298966 FANK1Q8TC84 345 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 DDIT4LQ96D03 193 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 POTEKPQ9BYX7 375 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 ZNF229Q9UJW7 825 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 SIGLEC7Q9Y286 467 aa18.74■□□□□ 0.59
SMCO4-201ENST00000298966 A0A087WXM4 84 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 C2orf72A6NCS6 295 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 CDC42EP2O14613 210 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 GNB5O14775 395 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 PTP4A3O75365 173 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 SOX14O95416 240 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 AHSA1O95433 338 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 TMIGD3P0DMS9 266 aaPredicted RBP18.73■□□□□ 0.59
SMCO4-201ENST00000298966 FUT1P19526 365 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 CRHBPP24387 322 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 SRD5A2P31213 254 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 SLC6A6P31641 620 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 SELENBP1Q13228 472 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 GINS1Q14691 196 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 FAM69AQ5T7M9 428 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 VASNQ6EMK4 673 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 C3orf33Q6P1S2 294 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 GTPBP8Q8N3Z3 284 aaPredicted RBP18.73■□□□□ 0.59
SMCO4-201ENST00000298966 OR8J1Q8NGP2 316 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 Q96MT0 163 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 OR52D1Q9H346 318 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 CALHM2Q9HA72 323 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 NANSQ9NR45 359 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 MXRA5Q9NR99 2828 aa18.73■□□□□ 0.59
SMCO4-201ENST00000298966 LINC01387J3KSC0 135 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 M0R3G1 203 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 SLC1A7O00341 560 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 GMFGO60234 142 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 NDUFB2O95178 105 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 CLPTM1O96005 669 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 DPP4P27487 766 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 GRK5P34947 590 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 SNRPGP62308 76 aaKnown RBP18.72■□□□□ 0.59
SMCO4-201ENST00000298966 EGR4Q05215 589 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 FOXF1Q12946 379 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 TMEM44Q2T9K0 475 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 CNIH3Q8TBE1 160 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 TSSK6Q9BXA6 273 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 GALNT8Q9NY28 637 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 ZNF226Q9NYT6 803 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 NDRG3Q9UGV2 375 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 DKKL1Q9UK85 242 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 FBXL2Q9UKC9 423 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 VDAC3Q9Y277 283 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 SLC6A5Q9Y345 797 aa18.72■□□□□ 0.59
SMCO4-201ENST00000298966 TMEM72A0PK05 275 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 C17orf51A8MQB3 221 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 FZD7O75084 574 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 WBP4O75554 376 aaKnown RBP18.71■□□□□ 0.59
SMCO4-201ENST00000298966 CH25HO95992 272 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 HIST1H2ABP04908 130 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 HPNP05981 417 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 GABRB1P18505 474 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 RPS4XP62701 263 aaKnown RBP18.71■□□□□ 0.59
SMCO4-201ENST00000298966 SLC25A30Q5SVS4 291 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 C1orf140Q5VVS0 124 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 MEDAGQ5VYS4 303 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 HIST3H2AQ7L7L0 130 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 SLC46A3Q7Z3Q1 461 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 LUZP2Q86TE4 346 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 HIST1H2ACQ93077 130 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 ZNF524Q96C55 264 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 WDYHV1Q96HA8 205 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 KLHDC3Q9BQ90 382 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 EGLN3Q9H6Z9 239 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 PLCXD1Q9NUJ7 323 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 SCN3BQ9NY72 215 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 HIF3AQ9Y2N7 669 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 CORINQ9Y5Q5 1042 aa18.71■□□□□ 0.59
SMCO4-201ENST00000298966 A6NHS1 94 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 TRIM64BA6NI03 449 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 SNTNA6NMZ2 147 aa18.7■□□□□ 0.58
SMCO4-201ENST00000298966 B4DXG7 233 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms