RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DLSTP36957 453 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 BMXP51813 675 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 Q0VFX4 171 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 MFSD8Q8NHS3 518 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 MCFD2Q8NI22 146 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 PAQR8Q8TEZ7 354 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 RELTQ969Z4 430 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 C1GALT1C1Q96EU7 318 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ARL5BQ96KC2 179 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 PCDHGB7Q9Y5F8 929 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 CORINQ9Y5Q5 1042 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 PLPP3O14495 311 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 SULT1B1O43704 296 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 ICMTO60725 284 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TNFSF15O95150 251 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TFP02787 698 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 MT-ND5P03915 603 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 CCL3P10147 92 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 OPRL1P41146 370 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TCF15Q12870 199 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF404Q494X3 552 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 STPG1Q5TH74 334 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 POC1BQ8TC44 478 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 SMAP2Q8WU79 429 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-202ENST00000297979 ANGPTL4Q9BY76 406 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 SH2D2AQ9NP31 389 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TRIM36Q9NQ86 728 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 SERINC1Q9NRX5 453 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TEKT2Q9UIF3 430 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 WDFY3Q8IZQ1 3526 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 RENP00797 406 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 CELP19835 753 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TGM1P22735 817 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 F8A1P23610 371 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 GTF2E2P29084 291 aaKnown RBP12.85□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF829Q3KNS6 432 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-202ENST00000297979 CLVS2Q5SYC1 327 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 SHEQ5VZ18 495 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 PLCZ1Q86YW0 608 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 GPALPP1Q8IXQ4 340 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 ALG12Q9BV10 488 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 POTEKPQ9BYX7 375 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
C9orf3-202ENST00000297979 MOKQ9UQ07 419 aa12.85□□□□□ -0.35
C9orf3-202ENST00000297979 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 H7C1C5 153 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 XKRYO14609 159 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TERTO14746 1132 aaKnown RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 RAD1O60671 282 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 SERPINA7P05543 415 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TFPIP10646 304 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 PYCR1P32322 319 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 RPL27P61353 136 aaKnown RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 LCN6P62502 163 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 OR7A5Q15622 319 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 LINC01590Q5TEZ4 76 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 SLC22A10Q63ZE4 541 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 DEFB124Q8NES8 71 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 OR6Q1Q8NGQ2 317 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 MMP27Q9H306 513 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 PCSK5Q92824 1860 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ZSCAN5BA6NJL1 495 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 H3BML4 177 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 LRRTM2O43300 516 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 IGHMP01871 453 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 IL11P20809 199 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 SOX6P35712 828 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 CAPZA2P47755 286 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ACKR1Q16570 336 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 CRTC2Q53ET0 693 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 H3F3CQ6NXT2 135 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 C3orf33Q6P1S2 294 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 OR2T4Q8NH00 348 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 BORCS5Q969J3 196 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TSSK2Q96PF2 358 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TXNIPQ9H3M7 391 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TBCCD1Q9NVR7 557 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ARHGEF9O43307 516 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 EFNA2O43921 213 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 SELENOFO60613 162 aa12.84□□□□□ -0.35
C9orf3-202ENST00000297979 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
C9orf3-202ENST00000297979 ACVR1BP36896 505 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms