RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 LCN1P1Q5VSP4 162 aa14□□□□□ -0.17
LSM6-201ENST00000296581 LEG1Q6P5S2 330 aa14□□□□□ -0.17
LSM6-201ENST00000296581 BEST3Q8N1M1 668 aa14□□□□□ -0.17
LSM6-201ENST00000296581 TMEM99Q8N816 258 aa14□□□□□ -0.17
LSM6-201ENST00000296581 EXD3Q8N9H8 876 aa14□□□□□ -0.17
LSM6-201ENST00000296581 ARHGAP9Q9BRR9 750 aa14□□□□□ -0.17
LSM6-201ENST00000296581 ZNF346Q9UL40 294 aaKnown RBP14□□□□□ -0.17
LSM6-201ENST00000296581 SPIN1Q9Y657 262 aaPredicted RBP14□□□□□ -0.17
LSM6-201ENST00000296581 C12orf71A8MTZ7 269 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 TRIM3O75382 744 aaPredicted RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 IGHMP01871 453 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 SPI1P17947 270 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 CD79BP40259 229 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 DIO1P49895 249 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 VBP1P61758 197 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 NCS1P62166 190 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 LSM3P62310 102 aaKnown RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 ZP4Q12836 540 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 TIGD3Q6B0B8 471 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 C3orf33Q6P1S2 294 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 ZNF227Q86WZ6 799 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 GTPBP8Q8N3Z3 284 aaPredicted RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 KLHL36Q8N4N3 616 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 OR1J4Q8NGS1 313 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 GRPEL2Q8TAA5 225 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 ADAMTS14Q8WXS8 1223 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 TM9SF4Q92544 642 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 TMEM246Q9BRR3 403 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 ASB6Q9NWX5 421 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 CAB39Q9Y376 341 aaPredicted RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 ZNF292O60281 2723 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 LIPT2A6NK58 231 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 CPEP16870 476 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 FKBP2P26885 142 aaKnown RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 DSCR4P56555 118 aaPredicted RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 FOXK1P85037 733 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 TAGLNQ01995 201 aaKnown RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 ACSM1Q08AH1 577 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 PON3Q15166 354 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.99□□□□□ -0.17
LSM6-201ENST00000296581 FAM109AQ8N4B1 249 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 DTX3Q8N9I9 347 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 POMGNT2Q8NAT1 580 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 SLC25A43Q8WUT9 341 aaPredicted RBP13.99□□□□□ -0.17
LSM6-201ENST00000296581 ZNRF4Q8WWF5 429 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 NDUFB11Q9NX14 153 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 ANKRD10Q9NXR5 420 aa13.99□□□□□ -0.17
LSM6-201ENST00000296581 ISPDA4D126 451 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 C11orf98E9PRG8 122 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 RNF13O43567 381 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 OR6A2O95222 327 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 P04436 131 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 TFPIP10646 304 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 PRKACAP17612 351 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 DPP4P27487 766 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 CYB561P49447 251 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 CLK1P49759 484 aaKnown RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 AIMP2Q13155 320 aaKnown RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 TPBGQ13641 420 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 OR7A5Q15622 319 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 TIMM50Q3ZCQ8 353 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ATAD3CQ5T2N8 411 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 LINC01590Q5TEZ4 76 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 TMPRSS7Q7RTY8 843 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 PHC2Q8IXK0 858 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ARIH2OSQ8N7S6 290 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ATP6V1C2Q8NEY4 427 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ZNF519Q8TB69 540 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 NDNFQ8TB73 568 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 GATAD2BQ8WXI9 593 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 SMPDL3BQ92485 455 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 KIAA1143Q96AT1 154 aaPredicted RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 TIMP4Q99727 224 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 OR51E2Q9H255 320 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 TXNIPQ9H3M7 391 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ALKBH4Q9NXW9 302 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 G3V3Y1 287 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 H3BML4 177 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 CBR3O75828 277 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 GLCEO94923 617 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 MRPL3P09001 348 aaKnown RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 NOVA1P51513 510 aaKnown RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 RPL27P61353 136 aaKnown RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 ACTC1P68032 377 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ACTA1P68133 377 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 GALEQ14376 348 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ACKR1Q16570 336 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 FAM205BPQ63HN1 556 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ZNF322Q6U7Q0 402 aaPredicted RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 H1FNTQ75WM6 255 aaPredicted RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 ADCK1Q86TW2 530 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 OR5M1Q8NGP8 315 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ZMYND19Q96E35 227 aaPredicted RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 GNRHR2Q96P88 292 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 ALG8Q9BVK2 526 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 SLA2Q9H6Q3 261 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 CHST11Q9NPF2 352 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 FANCFQ9NPI8 374 aa13.98□□□□□ -0.17
LSM6-201ENST00000296581 RPRD1BQ9NQG5 326 aaKnown RBP13.98□□□□□ -0.17
LSM6-201ENST00000296581 TEKT2Q9UIF3 430 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms