RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 RAB11FIP2Q7L804 512 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 ZNF550Q7Z398 422 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 OR5M1Q8NGP8 315 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 HMGB4Q8WW32 186 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 FBXO34Q9NWN3 711 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 TAS2R3Q9NYW6 316 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 CYB5R1Q9UHQ9 305 aa9.48□□□□□ -0.89
SKA1-201ENST00000285116 COLQQ9Y215 455 aaPredicted RBP9.48□□□□□ -0.89
SKA1-201ENST00000285116 GVINP1Q7Z2Y8 2422 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 PRRC2CQ9Y520 2896 aaKnown RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 FAM221BA6H8Z2 402 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 ZNF35P13682 527 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 MST1P26927 711 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 RAB13P51153 203 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 GPR143P51810 404 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 ART1P52961 327 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 SLC25A1P53007 311 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 PSMD4P55036 377 aaKnown RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 MPPED2Q15777 294 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 HFEQ30201 348 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 TP53I3Q53FA7 332 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 LRRN1Q6UXK5 716 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 SLC35F3Q8IY50 421 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 BPIFCQ8NFQ6 507 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 OR4E2Q8NGC2 313 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 SMAP2Q8WU79 429 aaPredicted RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 LIPHQ8WWY8 451 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 RNF166Q96A37 237 aaPredicted RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 COL26A1Q96A83 441 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 SMAD5Q99717 465 aaKnown RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 SEMA4CQ9C0C4 833 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 SRMSQ9H3Y6 488 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 FGF22Q9HCT0 170 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 RASL12Q9NYN1 266 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 TBC1D29Q9UFV1 150 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 FBXL4Q9UKA2 621 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 ZNF281Q9Y2X9 895 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 DMXL1Q9Y485 3027 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 TRBV2A0A0J9YWF9 115 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 A0A1W2PP55 124 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 A0A1W2PQU0 124 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 EFCAB7A8K855 629 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 ACOT7O00154 380 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 PIN1P1O15428 100 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 FGF17O60258 216 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 CTSVO60911 334 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 EGFP01133 1207 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 APEHP13798 732 aaKnown RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 PTH2RP49190 550 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 MEOX2P50222 304 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 PON3Q15166 354 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 DEFB134Q4QY38 66 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 CCDC36Q8IYA8 594 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 RFLNBQ8N5W9 214 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 RELL2Q8NC24 303 aaPredicted RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 NPEPL1Q8NDH3 523 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 OR51A7Q8NH64 312 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 PHOSPHO2Q8TCD6 241 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 S100A16Q96FQ6 103 aaKnown RBP9.47□□□□□ -0.89
SKA1-201ENST00000285116 DERL3Q96Q80 235 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 KXD1Q9BQD3 176 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 ADAP2Q9NPF8 381 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 CACNA1EQ15878 2313 aa9.47□□□□□ -0.89
SKA1-201ENST00000285116 HSPB2A8KAH6 182 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 SLC35E2P0CK97 266 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 HIST1H1CP16403 213 aaKnown RBP9.46□□□□□ -0.89
SKA1-201ENST00000285116 MGMTP16455 207 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 HSPB2Q16082 182 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 OR7E24Q6IFN5 339 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 SLC36A1Q7Z2H8 476 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 CYB561A3Q8NBI2 242 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 OR2AK2Q8NG84 335 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 OR52E2Q8NGJ4 325 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 OR52B4Q8NGK2 314 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 OR14A2Q96R54 314 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 ZFYVE21Q9BQ24 234 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 ESRP2Q9H6T0 727 aaKnown RBP9.46□□□□□ -0.89
SKA1-201ENST00000285116 BARX1Q9HBU1 254 aaPredicted RBP9.46□□□□□ -0.89
SKA1-201ENST00000285116 FOXJ3Q9UPW0 622 aa9.46□□□□□ -0.89
SKA1-201ENST00000285116 TBC1D3IA0A087WXS9 549 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 PYCARD-AS1I3L0S3 204 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 GOSR2O14653 212 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 IMPA2O14732 288 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 SIGLEC5O15389 551 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 ATG12O94817 140 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 APODP05090 189 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 VSIG10L2P0DP72 767 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 EDNRAP25101 427 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 DCTDP32321 178 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 GABRA3P34903 492 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 FAUP35544 74 aaKnown RBP9.46□□□□□ -0.9
SKA1-201ENST00000285116 TNFRSF4P43489 277 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 P2RX1P51575 399 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 SIGLEC14Q08ET2 396 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 MELKQ14680 651 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms