RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 UBE2ZQ9H832 354 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 WDR76Q9H967 626 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 LIN7CQ9NUP9 197 aaKnown RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 MMP17Q9ULZ9 603 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 TMED7Q9Y3B3 224 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 KLK4Q9Y5K2 254 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 CEPT1Q9Y6K0 416 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 CACNA1IQ9P0X4 2223 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF705FA8MVS1 300 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 YY2O15391 372 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 HCRTO43612 131 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF705DP0CH99 300 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF705BP0CI00 300 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 ARAFP10398 606 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 HOXD9P28356 352 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 TAGLN2P37802 199 aaKnown RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 NTHL1P78549 312 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 TNK1Q13470 666 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 MOGSQ13724 837 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 MRPL2Q5T653 305 aaKnown RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 FCRL6Q6DN72 434 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 TFAP2EQ6VUC0 442 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 PIWIL3Q7Z3Z3 882 aaKnown RBP3.77□□□□□ -1.81
SCN3A-201ENST00000283254 Q8IYB0 196 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 CLECL1Q8IZS7 167 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 METTL4Q8N3J2 472 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 OR10X1Q8NGY0 326 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 OR10J5Q8NHC4 309 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 HPSE2Q8WWQ2 592 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 ZBTB8AQ96BR9 441 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 TREX1Q9NSU2 369 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 NECAP2Q9NVZ3 263 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 COPS3Q9UNS2 423 aa3.77□□□□□ -1.81
SCN3A-201ENST00000283254 SMAD6O43541 496 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 TRAF3IP2O43734 574 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 POU3F3P20264 500 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 HLA-FP30511 346 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SUMO3P55854 103 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 BIDP55957 195 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 FLI1Q01543 452 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ZP2Q05996 745 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 LTBQ06643 244 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 LINC00696Q6ZRV3 163 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 BTLAQ7Z6A9 289 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 TSEN54Q7Z6J9 526 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 GLIS1Q8NBF1 620 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ZFP90Q8TF47 636 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 H1FXQ92522 213 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 NEURL3Q96EH8 262 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SGPP1Q9BX95 441 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 GORASP2Q9H8Y8 452 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 GNB4Q9HAV0 340 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 CLEC1BQ9P126 229 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 MRPS28Q9Y2Q9 187 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 TARM1B6A8C7 271 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 AIPO00170 330 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 C1orf105O95561 183 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 TXNDC12O95881 172 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 GLAP06280 429 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 CPEP16870 476 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ELK4P28324 431 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF93P35789 620 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 RPS5P46782 204 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 GPR12P47775 334 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 OLIG2Q13516 323 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 RPS26P11Q5JNZ5 115 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SLC35D3Q5M8T2 416 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 FAM185AQ8N0U4 392 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SECTM1Q8WVN6 248 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 C3orf49Q96BT1 292 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 FAM122AQ96E09 287 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 CSF3RQ99062 836 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SOX17Q9H6I2 414 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SIAEQ9HAT2 523 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 BARX1Q9HBU1 254 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 CSNK1G1Q9HCP0 422 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 USP36Q9P275 1121 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 LOXL2Q9Y4K0 774 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SIGLEC1Q9BZZ2 1709 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 COL6A6A6NMZ7 2263 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 NCBP2LA6PVI3 153 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 IDSB3KWA1 339 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 TNFRSF10AO00220 468 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 XRCC2O43543 280 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SULT1B1O43704 296 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 LCMT2O60294 686 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 MT-ND4LP03901 98 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 OR10J4P0C629 311 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SRFP11831 508 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ACKR3P25106 362 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 AGFG1P52594 562 aaKnown RBP3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF836Q6ZNA1 936 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SHISA6Q6ZSJ9 500 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF573Q86YE8 665 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 OR6V1Q8N148 313 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 RLN3Q8WXF3 142 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 OR6C1Q96RD1 312 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 SLC46A2Q9BY10 475 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 RNF32Q9H0A6 362 aa3.76□□□□□ -1.81
SCN3A-201ENST00000283254 PPIL3Q9H2H8 161 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms