RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 RBM7Q9Y580 266 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 VWA8A3KMH1 1905 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PTPN13Q12923 2485 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 C2orf74A8MZ97 194 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ZNF670-ZNF695F2Z2N8 137 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 RNF13O43567 381 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PRAMEF4O60810 478 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CSO75390 466 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 KDM4BO94953 1096 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 IGLV3-25P01717 112 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CA3P07451 260 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 GKN3PP0CG01 181 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PEPDP12955 493 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 EDN2P20800 178 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ATP5A1P25705 553 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 AK4P27144 223 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 IMPA1P29218 277 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PCGF2P35227 344 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CSNK1DP48730 415 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 GZMKP49863 264 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 F2RL1P55085 397 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 MRPS34P82930 218 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 ZNF33BQ06732 778 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 GAB1Q13480 694 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 DEFB110Q30KQ9 67 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ASPHD1Q5U4P2 390 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 C1QL3Q5VWW1 255 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PNCKQ6P2M8 343 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 FIGLAQ6QHK4 219 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ZNF474Q6S9Z5 364 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 CSNK1A1LQ8N752 337 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 HORMAD2Q8N7B1 307 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 OR6N2Q8NGY6 317 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NSMAFQ92636 917 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 MBD6Q96DN6 1003 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ASCL2Q99929 193 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CPPED1Q9BRF8 314 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 GPR174Q9BXC1 333 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PRRG4Q9BZD6 226 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 MMP28Q9H239 520 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NANSQ9NR45 359 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PEMTQ9UBM1 199 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 SLC7A7Q9UM01 511 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 GRIP1Q9Y3R0 1128 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 FXYD6-FXYD2A0A087WZ82 144 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NPIPA5A0A0B4J1W7 369 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CDHR4A6H8M9 788 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 TMEM202A6NGA9 273 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 FAM183AA6NL82 134 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NPIPA7E9PJI5 369 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 HOXA3O43365 443 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 LDB3O75112 727 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 TRIM3O75382 744 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 TOX4O94842 621 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CDK1P06493 297 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 HTR1AP08908 422 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NPIPA8P0DM63 369 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PRKACBP22694 351 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 LHCGRP22888 699 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ITGB7P26010 798 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 AHRP35869 848 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NR4A2P43354 598 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 AKR1D1P51857 326 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PFN3P60673 137 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 APOFQ13790 326 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 BCL2A1Q16548 175 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ZNF528Q3MIS6 628 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 EOGTQ5NDL2 527 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 CCNJQ5T5M9 372 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 PIP5KL1Q5T9C9 394 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 SFRP4Q6FHJ7 346 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 ETFRF1Q6IPR1 90 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 B3GLCTQ6Y288 498 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 TTLL10Q6ZVT0 673 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 SLC29A4Q7RTT9 530 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 OLIG3Q7RTU3 272 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 GID4Q8IVV7 300 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 TMEFF1Q8IYR6 380 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 OR13F1Q8NGS4 319 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 OR2AJ1Q8NGZ0 328 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 OR2L2Q8NH16 312 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 SLC38A5Q8WUX1 472 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 NR4A3Q92570 626 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 FGF13Q92913 245 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 RIT1Q92963 219 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 RFT1Q96AA3 541 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 SAT2Q96F10 170 aaPredicted RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 TGM7Q96PF1 710 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 HIST1H2AAQ96QV6 131 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 TAAR6Q96RI8 345 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 C19orf43Q9BQ61 176 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 POLDIP3Q9BY77 421 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 ACTRT3Q9BYD9 372 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 FXYD6Q9H0Q3 95 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 SLC6A15Q9H2J7 730 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ACTL8Q9H568 366 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ESRP2Q9H6T0 727 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 CWH43Q9H720 699 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 FN3KRPQ9HA64 309 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 IFT46Q9NQC8 304 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms