RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FAM69AQ5T7M9 428 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 CARD17Q5XLA6 110 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 WDR88Q6ZMY6 472 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 MSANTD1Q6ZTZ1 278 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 ADPRHL1Q8NDY3 354 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 NFKBIDQ8NI38 313 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 MGARPQ8TDB4 240 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 NEU4Q8WWR8 484 aaPredicted RBP7.69□□□□□ -1.18
TPM3-201ENST00000271850 SLC35B4Q969S0 331 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 MRPL24Q96A35 216 aaKnown RBP7.69□□□□□ -1.18
TPM3-201ENST00000271850 ZBTB18Q99592 522 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 RAB1BQ9H0U4 201 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 CENPHQ9H3R5 247 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 C12orf10Q9HB07 376 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 VAPAQ9P0L0 249 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 PRDM4Q9UKN5 801 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 IFT52Q9Y366 437 aa7.69□□□□□ -1.18
TPM3-201ENST00000271850 CMYA5Q8N3K9 4069 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 MGAM2Q2M2H8 2515 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 TRAV36DV7A0A075B6V5 113 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 A0A087WUJ7 227 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 TRPC5OSA6NMA1 111 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 CLIC1O00299 241 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 AIM2O14862 343 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 RP2O75695 350 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 PATE4P0C8F1 98 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 B4GALT1P15291 398 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 TCN1P20061 433 aaPredicted RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 PRKAR1BP31321 381 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 ARR3P36575 388 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 ALDH3B1P43353 468 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 MRPL19P49406 292 aaKnown RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 CHN2P52757 468 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 IL1RL1Q01638 556 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 PIGFQ07326 219 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 HNRNPA0Q13151 305 aaKnown RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 DAG1Q14118 895 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 MFSD13AQ14CX5 517 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 NPTX1Q15818 432 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 TMEM255AQ5JRV8 349 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 C6orf10Q5SRN2 563 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 NXNQ6DKJ4 435 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 DHRS4L2Q6PKH6 230 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 DEF8Q6ZN54 512 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 H1FNTQ75WM6 255 aaPredicted RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 MEX3DQ86XN8 651 aaKnown RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 KIRREL3Q8IZU9 778 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 GPR137CQ8N3F9 429 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 PAQR4Q8N4S7 273 aaPredicted RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 LINC01356Q8N9X3 169 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 OR4D11Q8NGI4 311 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 CLDND2Q8NHS1 167 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 BBS10Q8TAM1 723 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 UBASH3BQ8TF42 649 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 SLC38A4Q969I6 547 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 ITCHQ96J02 903 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 TSPAN32Q96QS1 320 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 KCNS3Q9BQ31 491 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 SYT3Q9BQG1 590 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 EBF4Q9BQW3 602 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 TMEFF2Q9UIK5 374 aaPredicted RBP7.68□□□□□ -1.18
TPM3-201ENST00000271850 FZR1Q9UM11 496 aa7.68□□□□□ -1.18
TPM3-201ENST00000271850 PLPP3O14495 311 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 UBDO15205 165 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 ANP32DO95626 131 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 ETS2P15036 469 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 IFNGR1P15260 489 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 PAX7P23759 505 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 GIPRP48546 466 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 DVL1P1P54792 670 aaPredicted RBP7.67□□□□□ -1.18
TPM3-201ENST00000271850 CDH12P55289 794 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 ERVS71-1P61550 626 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 LMO4P61968 165 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 FADDQ13158 208 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 CAMK2DQ13557 499 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 SQLEQ14534 574 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 OR1Q1Q15612 314 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 ALG10BQ5I7T1 473 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 HHATQ5VTY9 493 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 EPGNQ6UW88 154 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 RINLQ6ZS11 566 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 RFLNBQ8N5W9 214 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 ZNF540Q8NDQ6 660 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 GPR32P1Q8NGA4 272 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 GTF3AQ92664 365 aaKnown RBP7.67□□□□□ -1.18
TPM3-201ENST00000271850 TLCD1Q96CP7 247 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 ANKRD27Q96NW4 1050 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 NARFLQ9H6Q4 476 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 GMEB1Q9Y692 573 aa7.67□□□□□ -1.18
TPM3-201ENST00000271850 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 M0R3H8 397 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 TCF21O43680 179 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 SYNGR3O43761 229 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 OR2T1O43869 369 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 CLPTM1O96005 669 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 NAT2P11245 290 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 CD79AP11912 226 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms