RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 LIN37Q96GY3 246 aaPredicted RBP13.83□□□□□ -0.2
SF3B4-201ENST00000271628 MRGPRX4Q96LA9 322 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 FRMD6Q96NE9 622 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 CDC6Q99741 560 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 ALG12Q9BV10 488 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 C11orf54Q9H0W9 315 aaPredicted RBP13.83□□□□□ -0.2
SF3B4-201ENST00000271628 MRPL39Q9NYK5 338 aaKnown RBP13.83□□□□□ -0.2
SF3B4-201ENST00000271628 LINC00854A0A1B0GVQ3 168 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 B4DXG7 233 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 GABRPO00591 440 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 XKRYO14609 159 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 TFECO14948 347 aaPredicted RBP13.83□□□□□ -0.2
SF3B4-201ENST00000271628 TFP02787 698 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 RAB40ALP0C0E4 278 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 ICAM2P13598 275 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 AHCYP23526 432 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 OR12D2P58182 307 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 DBPQ10586 325 aaPredicted RBP13.83□□□□□ -0.2
SF3B4-201ENST00000271628 TBRG1Q3YBR2 411 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 MESTQ5EB52 335 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 SLC25A53Q5H9E4 307 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 MZT2AQ6P582 158 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 MFSD8Q8NHS3 518 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 ZPLD1Q8TCW7 415 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 SNX33Q8WV41 574 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 HDHD5Q9BXW7 423 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 MMP28Q9H239 520 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 PPP1R3EQ9H7J1 279 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 RNF121Q9H920 327 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 VDAC3Q9Y277 283 aa13.83□□□□□ -0.2
SF3B4-201ENST00000271628 PLA2G10O15496 165 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
SF3B4-201ENST00000271628 WISP1O95388 367 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 TCN2P20062 427 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 MYL9P24844 172 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 GRPRP30550 384 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 RCVRNP35243 200 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 RIN1Q13671 783 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 SF3A2Q15428 464 aaKnown RBP13.82□□□□□ -0.2
SF3B4-201ENST00000271628 CDONQ4KMG0 1287 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 CCDC157Q569K6 752 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 LINC01590Q5TEZ4 76 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 BICRALQ6AI39 1079 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 VASNQ6EMK4 673 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 GHDCQ8N2G8 530 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 EXD3Q8N9H8 876 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 C19orf18Q8NEA5 215 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 ENKURQ8TC29 256 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 THAP4Q8WY91 577 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 ZC3HAV1LQ96H79 300 aaKnown RBP13.82□□□□□ -0.2
SF3B4-201ENST00000271628 TMEM9BQ9NQ34 198 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 SERINC1Q9NRX5 453 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 COMMD3Q9UBI1 195 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
SF3B4-201ENST00000271628 KIF26BQ2KJY2 2108 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 C11orf98E9PRG8 122 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 PLPP3O14495 311 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 LRRTM2O43300 516 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SLC2A2P11168 524 aaPredicted RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 NAA10P41227 235 aaPredicted RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 EVX1P49640 407 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 GBX2P52951 348 aaPredicted RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 RPL27P61353 136 aaKnown RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 MRPS15P82914 257 aaKnown RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 EIF3IQ13347 325 aaKnown RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 TMEM164Q5U3C3 297 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 CDCP2Q5VXM1 449 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 ARSKQ6UWY0 536 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 MS4A15Q8N5U1 240 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 ZNRF4Q8WWF5 429 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SLC7A6Q92536 515 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 POTEKPQ9BYX7 375 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 OR11A1Q9GZK7 315 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 TXNIPQ9H3M7 391 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 PTGES2Q9H7Z7 377 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SRA1Q9HD15 236 aaKnown RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 PISDQ9UG56 409 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 ADAM30Q9UKF2 790 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 TCFL5Q9UL49 500 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 CHCHD2Q9Y6H1 151 aaPredicted RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 FTCDNL1E5RQL4 147 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 ARHGEF9O43307 516 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 TCEA1P23193 301 aaKnown RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 FKBP2P26885 142 aaKnown RBP13.81□□□□□ -0.2
SF3B4-201ENST00000271628 HLA-DMAP28067 261 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 PYCR1P32322 319 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 KIR2DL3P43628 341 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 CENPAP49450 140 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SSR4P51571 173 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SSPNQ14714 243 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SLC6A19Q695T7 634 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 MZT2BQ6NZ67 158 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 CNIH2Q6PI25 160 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 IL20RBQ6UXL0 311 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SSX6Q7RTT6 188 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 SLC16A9Q7RTY1 509 aa13.81□□□□□ -0.2
SF3B4-201ENST00000271628 MARCH9Q86YJ5 346 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms