RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 S1PR1P21453 382 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 BIVMQ86UB2 503 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 LRRTM1Q86UE6 522 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 MUC20Q8N307 709 aaPredicted RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 OR8S1Q8NH09 359 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 ADAD1Q96M93 576 aaKnown RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 GAL3ST1Q99999 423 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 CHST6Q9GZX3 395 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 CTNSO60931 367 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 GLSO94925 669 aaPredicted RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 CSTAP01040 98 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 IGF2P01344 180 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 HIST1H2ABP04908 130 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 CD1AP06126 327 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 ANXA2P07355 339 aaKnown RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 RAB40ALP0C0E4 278 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 MAZP56270 477 aaKnown RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 HIST3H2AQ7L7L0 130 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 RAB40AQ8WXH6 277 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 HIST1H2ACQ93077 130 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 SCARF2Q96GP6 870 aaPredicted RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 TTYH1Q9H313 450 aaPredicted RBP15.53■□□□□ 0.08
SPG7-201ENST00000268704 FBXL2Q9UKC9 423 aa15.53■□□□□ 0.08
SPG7-201ENST00000268704 MYO9BQ13459 2157 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 A0A087WUJ7 227 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 TMEM272A0A1B0GTI8 110 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 TNFSF14O43557 240 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 GMFGO60234 142 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 KCNJ13O60928 360 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 SPDEFO95238 335 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 TFF2Q03403 129 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 ILF3Q12906 894 aaKnown RBP eCLIP15.52■□□□□ 0.081e-6■■■■□ 19.3
SPG7-201ENST00000268704 CSNK1A1LQ8N752 337 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 FRMD1Q8N878 549 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 OR51D1Q8NGF3 324 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 RELTQ969Z4 430 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 FOXN4Q96NZ1 517 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 IGKV1D-42A0A075B6H8 117 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 SULT1B1O43704 296 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 APODP05090 189 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 CALCBP10092 127 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 ALKBH1Q13686 389 aaKnown RBP15.52■□□□□ 0.08
SPG7-201ENST00000268704 LRRC69Q6ZNQ3 347 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 SLC36A1Q7Z2H8 476 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 LSM14AQ8ND56 463 aaKnown RBP15.52■□□□□ 0.08
SPG7-201ENST00000268704 OR51S1Q8NGJ8 323 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 TMEM106AQ96A25 262 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 TMEM138Q9NPI0 162 aa15.52■□□□□ 0.08
SPG7-201ENST00000268704 PLATP00750 562 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 CCR4P51679 360 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 FAM220AQ7Z4H9 259 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 EID2Q8N6I1 236 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 RELL2Q8NC24 303 aaPredicted RBP15.52■□□□□ 0.07
SPG7-201ENST00000268704 PHYHIPQ92561 330 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 PNPLA2Q96AD5 504 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 C3orf49Q96BT1 292 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 KLHDC3Q9BQ90 382 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 SAV1Q9H4B6 383 aaPredicted RBP15.52■□□□□ 0.07
SPG7-201ENST00000268704 CERS4Q9HA82 394 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 GPR160Q9UJ42 338 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 ZNF337Q9Y3M9 751 aa15.52■□□□□ 0.07
SPG7-201ENST00000268704 SNRPGP15A8MWD9 76 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 GABRA1P14867 456 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 C4BPBP20851 252 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 GPR143P51810 404 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 AKR1D1P51857 326 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 IL10RAQ13651 578 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 ZNHIT3Q15649 155 aaPredicted RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 JAZF1Q86VZ6 243 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 ATOH1Q92858 354 aaPredicted RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 SHARPINQ9H0F6 387 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 SLITRK2Q9H156 845 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 WDR76Q9H967 626 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 EXOSC3Q9NQT5 275 aaKnown RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 LAMA1P25391 3075 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 DOCK8Q8NF50 2099 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 FOXS1O43638 330 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 RBBP9O75884 186 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 IFNA16P05015 189 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 IL5P05113 134 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 RBMS2Q15434 407 aaKnown RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 SLC35D3Q5M8T2 416 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 CCDC74AQ96AQ1 378 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 ZNF524Q96C55 264 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 VSTM2LQ96N03 204 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 UTP23Q9BRU9 249 aaKnown RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 RPP25Q9BUL9 199 aaKnown RBP15.51■□□□□ 0.07
SPG7-201ENST00000268704 CRISPLD2Q9H0B8 497 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 POLE3Q9NRF9 147 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 TRIOO75962 3097 aa15.51■□□□□ 0.07
SPG7-201ENST00000268704 TUBAL3A6NHL2 446 aa15.5■□□□□ 0.07
SPG7-201ENST00000268704 OR6C65A6NJZ3 312 aa15.5■□□□□ 0.07
SPG7-201ENST00000268704 ARPC3O15145 178 aa15.5■□□□□ 0.07
SPG7-201ENST00000268704 OIP5O43482 229 aa15.5■□□□□ 0.07
SPG7-201ENST00000268704 DLX5P56178 289 aa15.5■□□□□ 0.07
SPG7-201ENST00000268704 RPS4XP62701 263 aaKnown RBP15.5■□□□□ 0.07
SPG7-201ENST00000268704 MAT1AQ00266 395 aaKnown RBP15.5■□□□□ 0.07
SPG7-201ENST00000268704 SORDQ00796 357 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms