RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MCHR1Q99705 422 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 ARHGDIGQ99819 225 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 TMEM43Q9BTV4 400 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 KAT8Q9H7Z6 458 aaKnown RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 MRPL39Q9NYK5 338 aaKnown RBP8.44□□□□□ -1.06
VPS41-201ENST00000265745 ANGPT4Q9Y264 503 aa8.44□□□□□ -1.06
VPS41-201ENST00000265745 LRRN3E7EW58 273 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 M0R3G1 203 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 M0R3H8 397 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 PLPP3O14495 311 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 ANGPT2O15123 496 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 AKAP8O43823 692 aaKnown RBP8.43□□□□□ -1.06
VPS41-201ENST00000265745 C8BP07358 591 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 CELA3BP08861 270 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 USF1P22415 310 aaPredicted RBP8.43□□□□□ -1.06
VPS41-201ENST00000265745 ARR3P36575 388 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 MTPNP58546 118 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 SNRPD2P62316 118 aaKnown RBP8.43□□□□□ -1.06
VPS41-201ENST00000265745 IL1RL1Q01638 556 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 PUDPQ08623 228 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 SELPLGQ14242 412 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 CYP51A1Q16850 503 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 C6orf52Q5T4I8 152 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 METTL21CQ5VZV1 264 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 CARD17Q5XLA6 110 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 ZNF613Q6PF04 617 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 DHDDSQ86SQ9 333 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 MYPOPQ86VE0 399 aaPredicted RBP8.43□□□□□ -1.06
VPS41-201ENST00000265745 WDFY1Q8IWB7 410 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 IL17RDQ8NFM7 739 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 GPR32P1Q8NGA4 272 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 OR6T1Q8NGN1 323 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 EMC6Q9BV81 110 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 ASPNQ9BXN1 380 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 PLK3Q9H4B4 646 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 ZNF442Q9H7R0 627 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 VIPAS39Q9H9C1 493 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 MED29Q9NX70 200 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 B3GNT2Q9NY97 397 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 TRIM33Q9UPN9 1127 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 NOX1Q9Y5S8 564 aa8.43□□□□□ -1.06
VPS41-201ENST00000265745 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
VPS41-201ENST00000265745 IGHV2OR16-5A0A0B4J2B6 119 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 ZNF726A6NNF4 738 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 VSTM5A8MXK1 200 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 VWC2LB2RUY7 222 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 NDUFS8O00217 210 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 CHP2O43745 196 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 EDF1O60869 148 aaKnown RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 LYPD3O95274 346 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 MT-ATP6P00846 226 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 HLA-HP01893 362 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 OPN1SWP03999 348 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 THY1P04216 161 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 AHCYP23526 432 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 THBS4P35443 961 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 PDLIM4P50479 330 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 GZMMP51124 257 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 IDH3GP51553 393 aaPredicted RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 POU3F1Q03052 451 aaPredicted RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 CAMK2DQ13557 499 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 NFYCQ13952 458 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 NPTX1Q15818 432 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 CHRFAM7AQ494W8 412 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 CYB5R2Q6BCY4 276 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 VHLLQ6RSH7 139 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 WDR88Q6ZMY6 472 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 ZNF627Q7L945 461 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 CXXC5Q7LFL8 322 aaKnown RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 MDP1Q86V88 176 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 TSPYL5Q86VY4 417 aaPredicted RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 RBM45Q8IUH3 476 aaKnown RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 C10orf53Q8N6V4 93 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 ANKS4BQ8N8V4 417 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 OR4D11Q8NGI4 311 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 OR5J2Q8NH18 312 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 OR10A6Q8NH74 314 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 SPATA3Q8NHX4 192 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 ZNF75AQ96N20 296 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 FOXN4Q96NZ1 517 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 DOK1Q99704 481 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 VRK1Q99986 396 aaPredicted RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 SIKE1Q9BRV8 207 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 FBXO9Q9UK97 447 aaPredicted RBP8.42□□□□□ -1.06
VPS41-201ENST00000265745 USP22Q9UPT9 525 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 FKBP7Q9Y680 259 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 STAB1Q9NY15 2570 aa8.42□□□□□ -1.06
VPS41-201ENST00000265745 A0A0G2JND7 137 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 LOC390937A0A1W2PQ73 354 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 TMEM129A0AVI4 362 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 FBP2O00757 339 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 SEC14L2O76054 403 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 IFNA2P01563 188 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 ADORA3P0DMS8 318 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 IGHV4-31P0DP07 118 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 IFNGR1P15260 489 aa8.41□□□□□ -1.06
VPS41-201ENST00000265745 H2AFXP16104 143 aaPredicted RBP8.41□□□□□ -1.06
VPS41-201ENST00000265745 NPR2P20594 1047 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms