RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 KCNS2Q9ULS6 477 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 hCG_1809904A0A1W2PP81 198 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 A0A1W2PR64 198 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 A0A1W2PRV1 198 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 GPR37O15354 613 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 ELNP15502 786 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 BPIP17213 487 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 DAP3P51398 398 aaKnown RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 FAM74A1Q5RGS3 127 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PRR27Q6MZM9 219 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CHTF18Q8WVB6 975 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 TEPSINQ96N21 525 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 DPH7Q9BTV6 452 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SYNPO2LQ9H987 977 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PDLIM7Q9NR12 457 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SLC2A4RGQ9NR83 387 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SEMA4GQ9NTN9 838 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 A0A0B4J2A0 478 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 TMEM88BA6NKF7 163 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CCSO14618 274 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 RAB24Q969Q5 203 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 VAMP8Q9BV40 100 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 ZNF442Q9H7R0 627 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 THSD1Q9NS62 852 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SHPKQ9UHJ6 478 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 H3BSH0 61 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PGCP20142 388 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PTNP21246 168 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PXYLP1Q8TE99 480 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SPTSSAQ969W0 71 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 MMP26Q9NRE1 261 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PLXNB2O15031 1838 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 COL22A1Q8NFW1 1626 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 HMX2A2RU54 273 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 OR6C68A6NDL8 312 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 FBXO24O75426 580 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CD82P27701 267 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 IMPA1P29218 277 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 P2RY14Q15391 338 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 TEAD2Q15562 447 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 C4orf17Q53FE4 359 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SOWAHCQ53LP3 525 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 CLEC14AQ86T13 490 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 BPIFB2Q8N4F0 458 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CREB3L4Q8TEY5 395 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 DDIT4LQ96D03 193 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CMBLQ96DG6 245 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PLCXD1Q9NUJ7 323 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PLEKHJ1Q9NW61 149 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PARPBPQ9NWS1 579 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 ETV7Q9Y603 341 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 ACAA1P09110 424 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 METTL15P1P0C7V9 234 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 IL1RNP18510 177 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 GRPRP30550 384 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SLC10A1Q14973 349 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 NIPAL3Q6P499 406 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 FIBINQ8TAL6 211 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 GPR119Q8TDV5 335 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 C16orf70Q9BSU1 422 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PRDM7Q9NQW5 492 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 OTOGLQ3ZCN5 2332 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SLC22A23A1A5C7 686 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 A6NIZ1 184 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 K7ERQ8 282 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SYT5O00445 386 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 BCL2L11O43521 198 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 HCRTO43612 131 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 STATHP02808 62 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 RAP1BP61224 184 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CSNK2A1P68400 391 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 MELKQ14680 651 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CNKSR3Q6P9H4 555 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CSNK2A3Q8NEV1 391 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 OR4M1Q8NGD0 313 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 FAM3CQ92520 227 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 MMABQ96EY8 250 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 WFIKKN1Q96NZ8 548 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CNIH4Q9P003 139 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 METTL1Q9UBP6 276 aaKnown RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 FBXO7Q9Y3I1 522 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 IGKV6D-21A0A0A0MT36 114 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 CLEC3AO75596 197 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 ABLIM3O94929 683 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SLC9A3R2Q15599 337 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PABPC1L2AQ5JQF8 200 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 MANEAQ5SRI9 462 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 NCMAPQ5T1S8 102 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 HENMT1Q5T8I9 393 aaKnown RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 GLCCI1Q86VQ1 547 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 RNF113BQ8IZP6 322 aaKnown RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 TBC1D20Q96BZ9 403 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 SLCO5A1Q9H2Y9 848 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 DNAJC5Q9H3Z4 198 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 HRASLS2Q9NWW9 162 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 ZNF586Q9NXT0 402 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms