RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NKAPLQ5M9Q1 402 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 WFIKKN2Q8TEU8 576 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 CCDC107Q8WV48 283 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 MIB2Q96AX9 1013 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 OR7D2Q96RA2 312 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 POLE3Q9NRF9 147 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 MTFP1Q9UDX5 166 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 FAM96BQ9Y3D0 163 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 V9GY05 133 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 FAM86C2PA6NEL3 165 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 UNC119BA6NIH7 251 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ACOD1A6NK06 481 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 DUXAA6NLW8 204 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 DBX1A6NMT0 343 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 CTNSO60931 367 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 GLSO94925 669 aaPredicted RBP11.99□□□□□ -0.49
NUP54-201ENST00000264883 OR4E1P0C645 316 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 TSFMP43897 325 aaKnown RBP11.99□□□□□ -0.49
NUP54-201ENST00000264883 HTR5AP47898 357 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 F2RL1P55085 397 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 PJVKQ0ZLH3 352 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ILF3Q12906 894 aaKnown RBP eCLIP11.99□□□□□ -0.495e-6■■□□□ 11.7
NUP54-201ENST00000264883 INPP5JQ15735 1006 aaPredicted RBP11.99□□□□□ -0.49
NUP54-201ENST00000264883 EIPR1Q53HC9 387 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 OR52W1Q6IF63 320 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ENPP7Q6UWV6 458 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 IL34Q6ZMJ4 242 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 DNM1P46Q6ZS02 220 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ABHD13Q7L211 337 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 GDF7Q7Z4P5 450 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 C11orf96Q7Z7L8 435 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 AMZ2Q86W34 360 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 VRK2Q86Y07 508 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 DMRTC2Q8IXT2 367 aaPredicted RBP11.99□□□□□ -0.49
NUP54-201ENST00000264883 RFLNBQ8N5W9 214 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 SLC2A12Q8TD20 617 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 CYB5D2Q8WUJ1 264 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 RNF141Q8WVD5 230 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 MCHR1Q99705 422 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 RSRP1Q9BUV0 290 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 XKR8Q9H6D3 395 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 TMEM27Q9HBJ8 222 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 TMEM100Q9NV29 134 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 TAS2R8Q9NYW2 309 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 PLAGL1Q9UM63 463 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 COL4A3Q01955 1670 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 FEZF1A0PJY2 475 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 SULT2B1O00204 365 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 BHLHE40O14503 412 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 SMAD9O15198 467 aaKnown RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 PIN1P1O15428 100 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 MT-ND4LP03901 98 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 AKAIN1P0CW23 69 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 CALCBP10092 127 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 CLUP10909 449 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 GTF2F2P13984 249 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 ITPKBP27987 946 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 LAP3P28838 519 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 CSNK1EP49674 416 aaKnown RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 SIRPAP78324 504 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 POU4F2Q12837 409 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 SHHQ15465 462 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 UNQ9370/PRO34162Q6UXP9 181 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 OR5M8Q8NGP6 311 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 EDAQ92838 391 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 PELI1Q96FA3 418 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 HSPA12BQ96MM6 686 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 PDCD1LG2Q9BQ51 273 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 C8orf33Q9H7E9 229 aaPredicted RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 LAMA3Q16787 3333 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 H7BY64 318 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 OIP5O43482 229 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 PPP1R3DO95685 299 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 THY1P04216 161 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 HNRNPA1P09651 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
NUP54-201ENST00000264883 TMIGD3P0DMS9 266 aaPredicted RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 IL9P15248 144 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 BMP7P18075 431 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 FUT1P19526 365 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 CPT2P23786 658 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 EDNRAP25101 427 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 TEAD1P28347 426 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 ACTR1BP42025 376 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 CEBPEQ15744 281 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 VWA2Q5GFL6 755 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 MRM1Q6IN84 353 aaKnown RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 LSRQ86X29 649 aaPredicted RBP11.98□□□□□ -0.49
NUP54-201ENST00000264883 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 PRAP1Q96NZ9 151 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 MRI1Q9BV20 369 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 ACTRT3Q9BYD9 372 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 DPH1Q9BZG8 443 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 SYNPO2LQ9H987 977 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 SEC61A2Q9H9S3 476 aa11.98□□□□□ -0.49
NUP54-201ENST00000264883 A0A1B0GTI1 187 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms