RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SLC35D2Q76EJ3 337 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 HIST3H2AQ7L7L0 130 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 ZNF627Q7L945 461 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 POU5F2Q8N7G0 328 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 OR2T12Q8NG77 320 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 OR10H5Q8NGA6 315 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 OR4F15Q8NGB8 312 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 OR6N1Q8NGY5 312 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 OR6X1Q8NH79 312 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 HTRA1Q92743 480 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 HIST1H2ACQ93077 130 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 RCN3Q96D15 328 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 FBXO17Q96EF6 278 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 RHNO1Q9BSD3 238 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 POLR2J2Q9GZM3 115 aaKnown RBP13.97□□□□□ -0.17
USE1-201ENST00000263897 POLR2J3Q9H1A7 115 aaKnown RBP13.97□□□□□ -0.17
USE1-201ENST00000263897 MEPEQ9NQ76 525 aaPredicted RBP13.97□□□□□ -0.17
USE1-201ENST00000263897 B3GNT2Q9NY97 397 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 RIMS3Q9UJD0 308 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 ZNF229Q9UJW7 825 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 POFUT2Q9Y2G5 429 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 ABCA2Q9BZC7 2435 aa13.97□□□□□ -0.17
USE1-201ENST00000263897 ZNF503-AS2A6NEH8 195 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 KPNA4O00629 521 aaPredicted RBP13.96□□□□□ -0.17
USE1-201ENST00000263897 SEC14L2O76054 403 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 CELA3BP08861 270 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 CALCRP30988 508 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 SERPINF1P36955 418 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 OR1E2P47887 323 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 DSCR9P59020 149 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 HGFACQ04756 655 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 KRTAP1-1Q07627 177 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 PIN1Q13526 163 aaPredicted RBP13.96□□□□□ -0.17
USE1-201ENST00000263897 CYBRD1Q53TN4 286 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 DEF8Q6ZN54 512 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 MDP1Q86V88 176 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 NKAIN4Q8IVV8 208 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 SLC15A3Q8IY34 581 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 MICU2Q8IYU8 434 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 ULBP2Q9BZM5 246 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 SEC61A2Q9H9S3 476 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 CA10Q9NS85 328 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 CMTM6Q9NX76 183 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 AP3M1Q9Y2T2 418 aa13.96□□□□□ -0.17
USE1-201ENST00000263897 ELOVL7A1L3X0 281 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 ATP8B1O43520 1251 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 RNF13O43567 381 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 CCDC22O60826 627 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 SHOX2O60902 331 aaPredicted RBP13.95□□□□□ -0.18
USE1-201ENST00000263897 OR5F1O95221 314 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 MT-ND1P03886 318 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 UMPSP11172 480 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 COX4I1P13073 169 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 RBM34P42696 430 aaKnown RBP13.95□□□□□ -0.18
USE1-201ENST00000263897 CAPZA2P47755 286 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 CSNK1A1P48729 337 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 IDH3GP51553 393 aaPredicted RBP13.95□□□□□ -0.18
USE1-201ENST00000263897 EFNA4P52798 201 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 TAS2R41P59536 307 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 SELENOWP63302 87 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 ADIPOQQ15848 244 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 SLC46A3Q7Z3Q1 461 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 MYPOPQ86VE0 399 aaPredicted RBP13.95□□□□□ -0.18
USE1-201ENST00000263897 IL17RDQ8NFM7 739 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 TMEM54Q969K7 222 aa13.95□□□□□ -0.18
USE1-201ENST00000263897 IGHV4-30-2A0A087WSY4 118 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 IGHV2OR16-5A0A0B4J2B6 119 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 B9A039 149 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 BLOC1S5-TXNDC5H3BN57 136 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 PDE5AO76074 875 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 F12P00748 615 aaPredicted RBP13.94□□□□□ -0.18
USE1-201ENST00000263897 IGF2P01344 180 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 HLA-HP01893 362 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 OR4A8P0C604 315 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 THRBP10828 461 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 FUT1P19526 365 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 PCSK6P29122 969 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 NPRL3Q12980 569 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 LRRC23Q53EV4 343 aaPredicted RBP13.94□□□□□ -0.18
USE1-201ENST00000263897 LRFN4Q6PJG9 635 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 CLEC2AQ6UVW9 174 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 PIWIL3Q7Z3Z3 882 aaKnown RBP13.94□□□□□ -0.18
USE1-201ENST00000263897 ARPINQ7Z6K5 226 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 NUP37Q8NFH4 326 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 TMEM255BQ8WV15 326 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 SLC25A44Q96H78 314 aaPredicted RBP13.94□□□□□ -0.18
USE1-201ENST00000263897 TPD52L3Q96J77 140 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 ZNF75AQ96N20 296 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 FOXB1Q99853 325 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 EFCAB1Q9HAE3 211 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 GLTPQ9NZD2 209 aa13.94□□□□□ -0.18
USE1-201ENST00000263897 YLPM1P49750 1951 aaKnown RBP13.93□□□□□ -0.18
USE1-201ENST00000263897 RTTNQ86VV8 2226 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 VSTM5A8MXK1 200 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 INAFM1C9JVW0 142 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 BCL10O95999 233 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms