RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ZNF81P51508 661 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 SIRPAP78324 504 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 NTRK2Q16620 822 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 EXOSC6Q5RKV6 272 aaKnown RBP7.54□□□□□ -1.2
PTPN3-201ENST00000262539 TMEM69Q5SWH9 247 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 AWAT2Q6E213 333 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 NIPSNAP1Q9BPW8 284 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 NDUFB11Q9NX14 153 aa7.54□□□□□ -1.2
PTPN3-201ENST00000262539 C12orf71A8MTZ7 269 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 IDUAP35475 653 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 TGFBR3Q03167 851 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 RHEBQ15382 184 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 GLYR1Q49A26 553 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 TMEM244Q5VVB8 128 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ZNF584Q8IVC4 421 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 PIAS4Q8N2W9 510 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CCDC74AQ96AQ1 378 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 WDFY2Q96P53 400 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 HDGFL3Q9Y3E1 203 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 GON4LQ3T8J9 2241 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 GCM2O75603 506 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 PAHP00439 452 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CRYBA1P05813 215 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 SLC2A5P22732 501 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 POLR2IP36954 125 aaKnown RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CCR9P51686 369 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 DEFA5Q01523 94 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 HES1Q14469 280 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 EBPQ15125 230 aaKnown RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 OR8B8Q15620 311 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CDNFQ49AH0 187 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ESX1Q8N693 406 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 OR51G2Q8NGK0 314 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 GLYATL2Q8WU03 294 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 FER1L6-AS2Q96M78 137 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ZNF582Q96NG8 517 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 HCAR1Q9BXC0 346 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 SLC6A17Q9H1V8 727 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 GPR83Q9NYM4 423 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 OR51A7Q8NH64 312 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 NPRL2Q8WTW4 380 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 FOXRED1Q96CU9 486 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 TAS2R8Q9NYW2 309 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 IGKV3D-11A0A0A0MRZ8 115 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 P2RX6O15547 441 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 TXNDC12O95881 172 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 PTHP01270 115 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 SBK2P0C263 348 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 FGF5P12034 268 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CELP19835 753 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 RAB4BP61018 213 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CDONQ4KMG0 1287 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 FHL5Q5TD97 284 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 LEG1Q6P5S2 330 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CPEB2Q7Z5Q1 589 aaKnown RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ZC3H10Q96K80 434 aaKnown RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 SAMD8Q96LT4 415 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 SLC22A4Q9H015 551 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 MOB1AQ9H8S9 216 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ZNF160Q9HCG1 818 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 DOCK6Q96HP0 2047 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ZDBF2Q9HCK1 2354 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CCDC187A0A096LP49 1063 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 LDB3O75112 727 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 UTS2O95399 124 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 TBX6O95947 436 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CLEC3BP05452 202 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 SLC35A1P78382 337 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 PSG6Q00889 435 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 OR7A5Q15622 319 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 LAIR1Q6GTX8 287 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 DPPA2Q7Z7J5 298 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 OR5L1Q8NGL2 311 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 FLVCR1-AS1Q8TAF5 88 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 C3orf49Q96BT1 292 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 YIPF6Q96EC8 236 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CTRCQ99895 268 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 ZNF426Q9BUY5 554 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CNIH4Q9P003 139 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 EMC9Q9Y3B6 208 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 CHD5Q8TDI0 1954 aa7.53□□□□□ -1.2
PTPN3-201ENST00000262539 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 SMIM30A4D0T7 59 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 TNFSF12O43508 249 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 SULT1B1O43704 296 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.2
PTPN3-201ENST00000262539 TGM4P49221 684 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 ZNF687Q8N1G0 1237 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 CNOT9Q92600 299 aaKnown RBP7.52□□□□□ -1.2
PTPN3-201ENST00000262539 ANKRD9Q96BM1 317 aaPredicted RBP7.52□□□□□ -1.2
PTPN3-201ENST00000262539 ZNF587Q96SQ5 575 aaPredicted RBP7.52□□□□□ -1.2
PTPN3-201ENST00000262539 KLHL13Q9P2N7 655 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 SCP2D1Q9UJQ7 156 aa7.52□□□□□ -1.2
PTPN3-201ENST00000262539 SHROOM3Q8TF72 1996 aa7.52□□□□□ -1.21
PTPN3-201ENST00000262539 F5H5K5 113 aa7.52□□□□□ -1.21
PTPN3-201ENST00000262539 SULT2B1O00204 365 aa7.52□□□□□ -1.21
PTPN3-201ENST00000262539 TOR1AO14656 332 aa7.52□□□□□ -1.21
PTPN3-201ENST00000262539 GLCEO94923 617 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms