RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 DPP4P27487 766 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 PTH2RP49190 550 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 DIO1P49895 249 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 P2RX1P51575 399 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 KIAA1024LP59773 190 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 PSMA6P60900 246 aaKnown RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 RAB14P61106 215 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ACTA2P62736 377 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ACTG2P63267 376 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 FGD2Q7Z6J4 655 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 TEX19Q8NA77 164 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OR4D10Q8NGI6 311 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 COQ8AQ8NI60 647 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 FCAMRQ8WWV6 532 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 HGDQ93099 445 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 BMFQ96LC9 184 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 GINS4Q9BRT9 223 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 MKKSQ9NPJ1 570 aaPredicted RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 COPZ2Q9P299 210 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OR10H1Q9Y4A9 318 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 V9GY05 133 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 A0A1B0GVI7 797 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 LGALS8O00214 317 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 SIGLEC5O15389 551 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 SIGLEC14Q08ET2 396 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 NPSR1Q6W5P4 371 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OVCH1Q7RTY7 1134 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 GPAT4Q86UL3 456 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 SLITRK4Q8IW52 837 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OR14A16Q8NHC5 309 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 DVL3Q92997 716 aaPredicted RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 SLC22A18Q96BI1 424 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 MRGPRX1Q96LB2 322 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 CXorf58Q96LI9 332 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ADAD1Q96M93 576 aaKnown RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 MOGAT1Q96PD6 335 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 STACQ99469 402 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ALG12Q9BV10 488 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 MS4A7Q9GZW8 240 aaPredicted RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 KLHL9Q9P2J3 617 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ICAM5Q9UMF0 924 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 GTF2A1LQ9UNN4 478 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 KLF2Q9Y5W3 355 aaPredicted RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 EML5Q05BV3 1969 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 TRIOBPQ9H2D6 2365 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 TRAV8-7A0A075B6U6 113 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ARPC5O15511 151 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OIP5O43482 229 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 SULT1B1O43704 296 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 GALR3O60755 368 aaPredicted RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 NKX2-2O95096 273 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 MAOAP21397 527 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ZNF10P21506 573 aaPredicted RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 ITPKBP27987 946 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 POU4F2Q12837 409 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 DYRK1AQ13627 763 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 KIR2DS3Q14952 304 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 LIPNQ5VXI9 398 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 PWWP2BQ6NUJ5 590 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 LRRC69Q6ZNQ3 347 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OR5M1Q8NGP8 315 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 OR8S1Q8NH09 359 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 PPP1R14AQ96A00 147 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ZNF524Q96C55 264 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 RBM18Q96H35 190 aaKnown RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 SHDQ96IW2 340 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 RADILQ96JH8 1075 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 TRIM2Q9C040 744 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 SYNDIG1Q9H7V2 258 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 TCF7L1Q9HCS4 588 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 EMC3Q9P0I2 261 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 PIPOXQ9P0Z9 390 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 MYEF2Q9P2K5 600 aaKnown RBP9.16□□□□□ -0.94
LIG3-201ENST00000262327 WNT16Q9UBV4 365 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 SERTAD3Q9UJW9 196 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 FOXJ3Q9UPW0 622 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 ZNF281Q9Y2X9 895 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 MAB21L2Q9Y586 359 aa9.16□□□□□ -0.94
LIG3-201ENST00000262327 A0A087WV62 115 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 PYCARD-AS1I3L0S3 204 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 AIPO00170 330 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 ARHGDIBP52566 201 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 EFNB2P52799 333 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 BAMBIQ13145 260 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 ULK3Q6PHR2 472 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 STAC2Q6ZMT1 411 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 GLB1L2Q8IW92 636 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 CCDC36Q8IYA8 594 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 RSC1A1Q92681 617 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 S100A16Q96FQ6 103 aaKnown RBP9.15□□□□□ -0.94
LIG3-201ENST00000262327 WDR92Q96MX6 357 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 ZNF426Q9BUY5 554 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 ZNF416Q9BWM5 594 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 SLC39A1Q9NY26 324 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 ERVK-19Q9WJR5 959 aa9.15□□□□□ -0.94
LIG3-201ENST00000262327 GABARAPH6UMI1 98 aa9.15□□□□□ -0.95
LIG3-201ENST00000262327 L7N2F9 121 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms