RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 A0A1W2PRG6 482 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 PEX14O75381 377 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 TRIM3O75382 744 aaPredicted RBP20.09■□□□□ 0.81
SIX3-201ENST00000260653 ITGA3P26006 1051 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 OR12D2P58182 307 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 TUBA1BP68363 451 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 ATP1A1-AS1Q5TC04 95 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 TUBA1AQ71U36 451 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 C5orf34Q96MH7 638 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 NUAK2Q9H093 628 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 ASCL3Q9NQ33 180 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 DKKL1Q9UK85 242 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 COPS3Q9UNS2 423 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 MAGEB4O15481 346 aaPredicted RBP20.08■□□□□ 0.81
SIX3-201ENST00000260653 ZIC3O60481 467 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 OR2T7P0C7T2 308 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 GPR85P60893 370 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 ZP4Q12836 540 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 TMEM176BQ3YBM2 270 aaPredicted RBP20.08■□□□□ 0.81
SIX3-201ENST00000260653 RAET1LQ5VY80 246 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 VASNQ6EMK4 673 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 OR2T4Q8NH00 348 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 OR2T27Q8NH04 317 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 SSR3Q9UNL2 185 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 MOKQ9UQ07 419 aa20.08■□□□□ 0.81
SIX3-201ENST00000260653 SIRT4Q9Y6E7 314 aaPredicted RBP20.08■□□□□ 0.81
SIX3-201ENST00000260653 PRSS37A4D1T9 235 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 J3QLW9 94 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 MT-ND5P03915 603 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 ZNF19P17023 458 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 CD82P27701 267 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 GABRA5P31644 462 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 ENTPD1P49961 510 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 RUNX1T1Q06455 604 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 GDPGP1Q6ZNW5 385 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 ZNF248Q8NDW4 579 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 SLC25A43Q8WUT9 341 aaPredicted RBP20.08■□□□□ 0.8
SIX3-201ENST00000260653 ADAMTS14Q8WXS8 1223 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 DEPPQ9NTK1 212 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 NOX1Q9Y5S8 564 aa20.08■□□□□ 0.8
SIX3-201ENST00000260653 PTPRZ1P23471 2315 aaPredicted RBP20.08■□□□□ 0.8
SIX3-201ENST00000260653 E9PI62 339 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 CBR3O75828 277 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 POU3F1Q03052 451 aaPredicted RBP20.07■□□□□ 0.8
SIX3-201ENST00000260653 EEF1A1P5Q5VTE0 462 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 SLC39A7Q92504 469 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 CCDC86Q9H6F5 360 aaKnown RBP20.07■□□□□ 0.8
SIX3-201ENST00000260653 TXNL4BQ9NX01 149 aaKnown RBP20.07■□□□□ 0.8
SIX3-201ENST00000260653 B3GALT5Q9Y2C3 310 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 PCDHGB7Q9Y5F8 929 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 NCKAP5O14513 1909 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 IFNGR1P15260 489 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 BDH1Q02338 343 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 WDFY1Q8IWB7 410 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 TMED9Q9BVK6 235 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 TRIM36Q9NQ86 728 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 TEKT2Q9UIF3 430 aa20.07■□□□□ 0.8
SIX3-201ENST00000260653 TVP23AA6NH52 213 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 FZD7O75084 574 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 GPANK1O95872 356 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 NOVA1P51513 510 aaKnown RBP20.06■□□□□ 0.8
SIX3-201ENST00000260653 FABP5Q01469 135 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 AIMP2Q13155 320 aaKnown RBP20.06■□□□□ 0.8
SIX3-201ENST00000260653 TP53I3Q53FA7 332 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 ABHD17BQ5VST6 288 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 SPINK14Q6IE38 97 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 KIAA1143Q96AT1 154 aaPredicted RBP20.06■□□□□ 0.8
SIX3-201ENST00000260653 IP6K3Q96PC2 410 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 DCLRE1CQ96SD1 692 aaKnown RBP20.06■□□□□ 0.8
SIX3-201ENST00000260653 LRFN1Q9P244 771 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 OR2M5A3KFT3 312 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 SLC30A4O14863 429 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 TM4SF5O14894 197 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 INHBBP09529 407 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 CD96P40200 585 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 HSF1Q00613 529 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 CRTC2Q53ET0 693 aaPredicted RBP20.06■□□□□ 0.8
SIX3-201ENST00000260653 C22orf42Q6IC83 251 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 VASH1Q7L8A9 365 aaPredicted RBP20.06■□□□□ 0.8
SIX3-201ENST00000260653 MED29Q9NX70 200 aa20.06■□□□□ 0.8
SIX3-201ENST00000260653 LRRC3CA6NJW4 275 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 NPIPA5E9PKD4 350 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 CEACAM1P13688 526 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 OR2B6P58173 313 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 TOMM20Q15388 145 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 RPTNQ6XPR3 784 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 GPALPP1Q8IXQ4 340 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 VSX1Q9NZR4 365 aaPredicted RBP20.05■□□□□ 0.8
SIX3-201ENST00000260653 B3GAT1Q9P2W7 334 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 NPIPA1Q9UND3 350 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 ZNF670-ZNF695F2Z2N8 137 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 DYNC1I2Q13409 638 aaKnown RBP20.05■□□□□ 0.8
SIX3-201ENST00000260653 SLC35D2Q76EJ3 337 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 VASH2Q86V25 355 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 TIGD4Q8IY51 512 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 CLEC1AQ8NC01 280 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 ASB10Q8WXI3 467 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 TXNDC15Q96J42 360 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 HDGFL3Q9Y3E1 203 aa20.05■□□□□ 0.8
SIX3-201ENST00000260653 GRIP1Q9Y3R0 1128 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms