RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 OR14I1A6ND48 311 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 RHPN2P1A8MT19 583 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PYCARD-AS1I3L0S3 204 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 TMIGD3P0DMS9 266 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 AKR1C4P17516 323 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 P2RX1P51575 399 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PLCXD2Q0VAA5 305 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 FAM53BQ14153 422 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 RBMS2Q15434 407 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 NSDHLQ15738 373 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF658BQ4V348 819 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 SFRP5Q5T4F7 317 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 RAB12Q6IQ22 244 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 KCTD18Q6PI47 426 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 CFAP77Q6ZQR2 320 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 OVCH1Q7RTY7 1134 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 KCTD20Q7Z5Y7 419 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF584Q8IVC4 421 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 TMEM151BQ8IW70 566 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CA13Q8N1Q1 262 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 INO80EQ8NBZ0 244 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 ACBD4Q8NC06 268 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 KLHDC7BQ96G42 594 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 SLC25A44Q96H78 314 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 MS4A3Q96HJ5 214 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 LYRM4Q9HD34 91 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 FAM60AQ9NP50 221 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 OR2S2Q9NQN1 319 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 SDHAF2Q9NX18 166 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 NUP50Q9UKX7 468 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ENTPD2Q9Y5L3 495 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 FNDC1Q4ZHG4 1894 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 A0A0C4DFX4 3053 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 MEIKINA0A087WXM9 373 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 TRAV1-2A0A0B4J238 106 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 C2orf72A6NCS6 295 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CCSO14618 274 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CTNSO60931 367 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CBX7O95931 251 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 HLA-DQB1P01920 261 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CELA2BP08218 269 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 AKAIN1P0CW23 69 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF28P17035 718 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CD53P19397 219 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 IGFBP4P22692 258 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 S100A11P31949 105 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CDKN2AP42771 156 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 ARRB1P49407 418 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 BLKP51451 505 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PRKXP51817 358 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 RIDAP52758 137 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 HTRA4P83105 476 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 PUDPQ08623 228 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ACSM1Q08AH1 577 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 DYRK1AQ13627 763 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 MELKQ14680 651 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 AANATQ16613 207 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PRICKLE4Q2TBC4 344 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 RNASE10Q5GAN6 216 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 SLC6A19Q695T7 634 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 WBP2NLQ6ICG8 309 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 TSSK4Q6SA08 328 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CBLN3Q6UW01 205 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ARSKQ6UWY0 536 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 GSG1LQ6UXU4 331 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 DGAT2L6Q6ZPD8 337 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 IDO2Q6ZQW0 420 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 RTL10Q7L3V2 364 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 NUP54Q7Z3B4 507 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF546Q86UE3 836 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 GPAT4Q86UL3 456 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 LIX1LQ8IVB5 337 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 SYS1Q8N2H4 156 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF454Q8N9F8 522 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 OR13C3Q8NGS6 347 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 OR10AC1Q8NH08 325 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 BAHD1Q8TBE0 780 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 TMEM41AQ96HV5 264 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PGLYRP3Q96LB9 341 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PTDSS2Q9BVG9 487 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 SLC6A15Q9H2J7 730 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 WDR76Q9H967 626 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 UBQLN4Q9NRR5 601 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 DNAJB12Q9NXW2 375 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 SLC39A1Q9NY26 324 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 DHCR7Q9UBM7 475 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 OR5V1Q9UGF6 321 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 KCNG2Q9UJ96 466 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 DTX4Q9Y2E6 619 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 A0A087WV62 115 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 METTL21EPA6NDL7 271 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF736B4DX44 427 aaPredicted RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 H3BML4 177 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 ZNF264O43296 627 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 CD3DP04234 171 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 DCNP07585 359 aaKnown RBP4.33□□□□□ -1.72
USP44-201ENST00000258499 NGFRP08138 427 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 PNMTP11086 282 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 IL9P15248 144 aa4.33□□□□□ -1.72
USP44-201ENST00000258499 GALP22466 123 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms