RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TGFAP01135 160 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 BGLAPP02818 100 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 HLA-DOBP13765 273 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 DAOP14920 347 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 ZNF14P17017 642 aaPredicted RBP8.89□□□□□ -0.99
VPS50-201ENST00000251739 HNF1AP20823 631 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 NR4A1P22736 598 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 SNTB2Q13425 540 aaKnown RBP8.89□□□□□ -0.99
VPS50-201ENST00000251739 CARTPTQ16568 116 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 MS4A18Q3C1V0 323 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 VHLLQ6RSH7 139 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 EPGNQ6UW88 154 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 NET1Q7Z628 596 aaPredicted RBP8.89□□□□□ -0.99
VPS50-201ENST00000251739 C20orf196Q8IYI0 205 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 SCAIQ8N9R8 606 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 IL17RDQ8NFM7 739 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 MGARPQ8TDB4 240 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 DNAJA4Q8WW22 397 aaPredicted RBP8.89□□□□□ -0.99
VPS50-201ENST00000251739 NEU4Q8WWR8 484 aaPredicted RBP8.89□□□□□ -0.99
VPS50-201ENST00000251739 LRR1Q96L50 414 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 IKZF5Q9H5V7 419 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 TESQ9UGI8 421 aaKnown RBP8.89□□□□□ -0.99
VPS50-201ENST00000251739 USP22Q9UPT9 525 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 CORINQ9Y5Q5 1042 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 PKD1L1Q8TDX9 2849 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 AKAP8O43823 692 aaKnown RBP8.88□□□□□ -0.99
VPS50-201ENST00000251739 HLA-HP01893 362 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 ZNF35P13682 527 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 GTF2E2P29084 291 aaKnown RBP8.88□□□□□ -0.99
VPS50-201ENST00000251739 EVX1P49640 407 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 CHN2P52757 468 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 CDH15P55291 814 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 NPRL3Q12980 569 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 DAG1Q14118 895 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 MFSD13AQ14CX5 517 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 ADRM1Q16186 407 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 IQCCQ4KMZ1 466 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 ALG10BQ5I7T1 473 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 GCNT6Q5T4J0 391 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 REEP3Q6NUK4 255 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 ULK3Q6PHR2 472 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 SPATA21Q7Z572 469 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 NFKBIDQ8NI38 313 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 CKAP2Q8WWK9 683 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 MRPL24Q96A35 216 aaKnown RBP8.88□□□□□ -0.99
VPS50-201ENST00000251739 MOGAT1Q96PD6 335 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 WFDC6Q9BQY6 131 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 MRPL37Q9BZE1 423 aaKnown RBP8.88□□□□□ -0.99
VPS50-201ENST00000251739 TMEM38AQ9H6F2 299 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 CACYBPQ9HB71 228 aaKnown RBP8.88□□□□□ -0.99
VPS50-201ENST00000251739 VAPAQ9P0L0 249 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 SLAMF8Q9P0V8 285 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 RPS6KB2Q9UBS0 482 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 USH1CQ9Y6N9 552 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 DYSFO75923 2080 aa8.88□□□□□ -0.99
VPS50-201ENST00000251739 C5orf58C9J3I9 102 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 M0R3G1 203 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 B4GALT1P15291 398 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 GPX2P18283 190 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 PCBP3P57721 371 aaKnown RBP8.87□□□□□ -0.99
VPS50-201ENST00000251739 RGS8P57771 180 aaPredicted RBP8.87□□□□□ -0.99
VPS50-201ENST00000251739 MAGOHP61326 146 aaKnown RBP8.87□□□□□ -0.99
VPS50-201ENST00000251739 CDK6Q00534 326 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 PUDPQ08623 228 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 C1DQ13901 141 aaKnown RBP8.87□□□□□ -0.99
VPS50-201ENST00000251739 SQLEQ14534 574 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 TRIP10Q15642 601 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 FXNQ16595 210 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 GSG1Q2KHT4 349 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 PAGE3Q5JUK9 113 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 KRT80Q6KB66 452 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 UEVLDQ8IX04 471 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 RFLNBQ8N5W9 214 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 LINC01356Q8N9X3 169 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 UBASH3BQ8TF42 649 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 SLC47A1Q96FL8 570 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 C7orf26Q96N11 449 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 SNX18Q96RF0 628 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 TMEM43Q9BTV4 400 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 EMC6Q9BV81 110 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 RACGAP1Q9H0H5 632 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 DENND2DQ9H6A0 471 aaPredicted RBP8.87□□□□□ -0.99
VPS50-201ENST00000251739 DYNLRB1Q9NP97 96 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 TCF7L2Q9NQB0 619 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 MED29Q9NX70 200 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 MRPL39Q9NYK5 338 aaKnown RBP8.87□□□□□ -0.99
VPS50-201ENST00000251739 MEGF8Q7Z7M0 2845 aa8.87□□□□□ -0.99
VPS50-201ENST00000251739 TANC2Q9HCD6 1990 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 LRRN3E7EW58 273 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 LYNX1G3V0Z9 82 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 SYNGR3O43761 229 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 FMO6PO60774 539 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 ERLIN1O75477 346 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 LYPD3O95274 346 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 ERCC1P07992 297 aaPredicted RBP8.86□□□□□ -0.99
VPS50-201ENST00000251739 ADRA2AP08913 450 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 LYNX1P0DP58 116 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 PPIBP23284 216 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms