RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 BAMBIQ13145 260 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 HLA-BQ31612 363 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 PRAMEF17Q5VTA0 474 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 OR6V1Q8N148 313 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 SPICQ8N5J4 248 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 OR4K13Q8NH42 304 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 ORAI1Q96D31 301 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 ANKRD10Q9NXR5 420 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 FLRT3Q9NZU0 649 aa15.48■□□□□ 0.07
FOXA1-201ENST00000250448 A8MUA0 341 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 M0R296 226 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 CXCL2P19875 107 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 CSF2RBP32927 897 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 PSMB10P40306 273 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 FHL1Q13642 323 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 GGTLC2Q14390 218 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 APOOLQ6UXV4 268 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 GLDNQ6ZMI3 551 aaPredicted RBP15.47■□□□□ 0.07
FOXA1-201ENST00000250448 CDRT4Q8N9R6 151 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 SFXN2Q96NB2 322 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 CA10Q9NS85 328 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 SERTAD3Q9UJW9 196 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 A0A1B0GWA3 101 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 CPED1A4D0V7 1026 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 AIPO00170 330 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 PDCD5O14737 125 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 GIPP09681 153 aaPredicted RBP15.47■□□□□ 0.07
FOXA1-201ENST00000250448 TLX1P31314 330 aaPredicted RBP15.47■□□□□ 0.07
FOXA1-201ENST00000250448 ERV3-1Q14264 604 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 NHLRC3Q5JS37 347 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 OLFML2AQ68BL7 652 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 FAM198BQ6UWH4 519 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 C3P1Q6ZMU1 363 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 EID2Q8N6I1 236 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 CNOT9Q92600 299 aaKnown RBP15.47■□□□□ 0.07
FOXA1-201ENST00000250448 PPA2Q9H2U2 334 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 NCDNQ9UBB6 729 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 SLC22A7Q9Y694 548 aa15.47■□□□□ 0.07
FOXA1-201ENST00000250448 PLSCR5A0PG75 271 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 IFITM5A6NNB3 132 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 L7N2F9 121 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 PIN1P1O15428 100 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 HIST1H1CP16403 213 aaKnown RBP15.46■□□□□ 0.07
FOXA1-201ENST00000250448 SRMP19623 302 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 DPP4P27487 766 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 SLC43A2Q8N370 569 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 PHYHIPQ92561 330 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 STACQ99469 402 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 UCK1Q9HA47 277 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 ZNF69Q9UC07 566 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 CHRNA9Q9UGM1 479 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 ATXN7L1Q9ULK2 861 aaPredicted RBP15.46■□□□□ 0.07
FOXA1-201ENST00000250448 ACOD1A6NK06 481 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 BET1O15155 118 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 FGF17O60258 216 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 GPRIN2O60269 458 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 NGFRP08138 427 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 ZP3P21754 424 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 ZNF600Q6ZNG1 722 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 FCRLAQ7L513 359 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 SERPINA12Q8IW75 414 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 CA13Q8N1Q1 262 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 FCAMRQ8WWV6 532 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 TCTN2Q96GX1 697 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 LRFN5Q96NI6 719 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 NUDT22Q9BRQ3 303 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 SCPEP1Q9HB40 452 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 NOX3Q9HBY0 568 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 FBXL3Q9UKT7 428 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 COPS3Q9UNS2 423 aa15.46■□□□□ 0.07
FOXA1-201ENST00000250448 WDFY3Q8IZQ1 3526 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 GXYLT2A0PJZ3 443 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 TLCD2A6NGC4 264 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 CPN1P15169 458 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 IFNGR1P15260 489 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 EPHA8P29322 1005 aaPredicted RBP15.46■□□□□ 0.06
FOXA1-201ENST00000250448 ZNF433Q8N7K0 673 aaPredicted RBP15.46■□□□□ 0.06
FOXA1-201ENST00000250448 CCDC74AQ96AQ1 378 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 PTCHD1Q96NR3 888 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 ZNF426Q9BUY5 554 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 REG4Q9BYZ8 158 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 GAREM1Q9H706 876 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 KLK11Q9UBX7 282 aa15.46■□□□□ 0.06
FOXA1-201ENST00000250448 TNRC6BQ9UPQ9 1833 aaKnown RBP15.45■□□□□ 0.06
FOXA1-201ENST00000250448 NUDT21O43809 227 aaKnown RBP15.45■□□□□ 0.06
FOXA1-201ENST00000250448 BRINP1O60477 761 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 AK1P00568 194 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 HOXD4P09016 255 aaPredicted RBP15.45■□□□□ 0.06
FOXA1-201ENST00000250448 PTH2RP49190 550 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 RAP2BP61225 183 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 GUSBP11Q6P575 273 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 ZAR1Q86SH2 424 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 MEIOBQ8N635 442 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 OR14A16Q8NHC5 309 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 SDHAF2Q9NX18 166 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 A0A087WV62 115 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 A0A1B0GTQ1 180 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.45■□□□□ 0.06
FOXA1-201ENST00000250448 ANKRD20A5PA0PJZ0 165 aa15.45■□□□□ 0.06
FOXA1-201ENST00000250448 SULT1B1O43704 296 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms