RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SCN3AQ9NY46 2000 aa7.15□□□□□ -1.27
CXCR4-201ENST00000241393 CHD9Q3L8U1 2897 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 C2orf92A0A1B0GVN3 265 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 FAM240BA0A1B0GVZ2 78 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 FAM25AB3EWG3 89 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 FAM25CB3EWG5 89 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 FAM25GB3EWG6 89 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 TFECO14948 347 aaPredicted RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ARPC3O15145 178 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 OGG1O15527 345 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 PRAMEF2O60811 474 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CTNSO60931 367 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 GATBO75879 557 aaKnown RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 NDUFB2O95178 105 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 OR2T7P0C7T2 308 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 RNH1P13489 461 aaKnown RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 GLULP15104 373 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 PVRP15151 417 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ERP29P30040 261 aaKnown RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 GALNSP34059 522 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 INPP1P49441 399 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 EMDP50402 254 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 BLKP51451 505 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 NKX2-5P52952 324 aaPredicted RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ATP12AP54707 1039 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 VSX2P58304 361 aaPredicted RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 MRPS15P82914 257 aaKnown RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 PSG6Q00889 435 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF85Q03923 595 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 HSF2Q03933 536 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 LGALS3BPQ08380 585 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 BIKQ13323 160 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CRMP1Q14194 572 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 FGFBP1Q14512 234 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CDK10Q15131 360 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 P2RY14Q15391 338 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 SF3B4Q15427 424 aaKnown RBP eCLIP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ALG10BQ5I7T1 473 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 SLC35D3Q5M8T2 416 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ABHD17BQ5VST6 288 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 PYHIN1Q6K0P9 492 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 RGS7BPQ6MZT1 257 aaPredicted RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 SFXN4Q6P4A7 337 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 BAIAP2L2Q6UXY1 529 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 OR2T27Q8NH04 317 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 SMPDL3BQ92485 455 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CREB3L1Q96BA8 519 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 NACC2Q96BF6 587 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 MSANTD3Q96H12 275 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CMTM3Q96MX0 182 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 VSTM2LQ96N03 204 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 PELOQ9BRX2 385 aaKnown RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 SLA2Q9H6Q3 261 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 NIPAL2Q9H841 368 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 MED20Q9H944 212 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ERVMER34-1Q9H9K5 563 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 MCCC2Q9HCC0 563 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 MKKSQ9NPJ1 570 aaPredicted RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 RPRD1BQ9NQG5 326 aaKnown RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 FLRT3Q9NZU0 649 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 ABRACLQ9P1F3 81 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 EXTL2Q9UBQ6 330 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 DKK4Q9UBT3 224 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CHRNA9Q9UGM1 479 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 CA14Q9ULX7 337 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 SIRT4Q9Y6E7 314 aaPredicted RBP7.14□□□□□ -1.27
CXCR4-201ENST00000241393 PIAS3Q9Y6X2 628 aa7.14□□□□□ -1.27
CXCR4-201ENST00000241393 NPIPA5A0A0B4J1W7 369 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 A0A0B4J293 547 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 SPTY2D1-AS1A0A0U1RR47 76 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.13□□□□□ -1.27
CXCR4-201ENST00000241393 LINC00854A0A1B0GVQ3 168 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.13□□□□□ -1.27
CXCR4-201ENST00000241393 SMIM30A4D0T7 59 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 NPIPA7E9PJI5 369 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF749O43361 778 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 RDH16O75452 317 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ARL6IP5O75915 188 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 PPP1R3DO95685 299 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 NPIPA8P0DM63 369 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 CHRNB1P11230 501 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 IL9P15248 144 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 GABRG2P18507 467 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ELK1P19419 428 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 FUT1P19526 365 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 EIF2B5Q13144 721 aaKnown RBP7.13□□□□□ -1.27
CXCR4-201ENST00000241393 FHL1Q13642 323 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 FAM53BQ14153 422 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 TATDN3Q17R31 274 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 CCDC58Q4VC31 144 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 KIAA0895LQ68EN5 471 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ARL9Q6T311 187 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 DPY19L2P2Q6ZN68 376 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 NOXA1Q86UR1 476 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 GATAD2AQ86YP4 633 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 SLC22A18ASQ8N1D0 253 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ASCC1Q8N9N2 400 aaKnown RBP7.13□□□□□ -1.27
CXCR4-201ENST00000241393 OR6C4Q8NGE1 309 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 OR51A7Q8NH64 312 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms