RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 MOGAT1Q96PD6 335 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 STACQ99469 402 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 FUZQ9BT04 418 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 A0A1W2PQ09 198 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF670-ZNF695F2Z2N8 137 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 MRPS14O60783 128 aaKnown RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 WDPCPO95876 746 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 UBL4AP11441 157 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 S1PR1P21453 382 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 CTBP2P56545 445 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF169Q14929 603 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 PCOLCEQ15113 449 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 AADACL4Q5VUY2 407 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 BICRALQ6AI39 1079 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 SSX6Q7RTT6 188 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 SLC29A4Q7RTT9 530 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ANKRD37Q7Z713 158 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 SAMD12Q8N8I0 201 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 OR5M1Q8NGP8 315 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 GPR119Q8TDV5 335 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 MIB2Q96AX9 1013 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 JSRP1Q96MG2 331 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 TSPAN10Q9H1Z9 355 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 BEX1Q9HBH7 125 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 PRODH2Q9UF12 536 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 TESQ9UGI8 421 aaKnown RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 AK6Q9Y3D8 172 aaKnown RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 DNAJC13O75165 2243 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 A0A1B0GTH9 108 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ANKUB1A6NFN9 424 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 G3V3Y1 287 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 CHP2O43745 196 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 NDUFB2O95178 105 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ONECUT2O95948 504 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 HTR1FP30939 366 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ACAA2P42765 397 aaKnown RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 EIF1AXP47813 144 aaKnown RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 CLDN12P56749 244 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 MFAP5Q13361 173 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 CEBPEQ15744 281 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 PRAMEF8Q5VWM4 474 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 PRAMEF7Q5VXH5 474 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 NIPAL1Q6NVV3 410 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF322Q6U7Q0 402 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 ESPNLQ6ZVH7 1005 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 NANOGNBQ7Z5D8 188 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 SERPINA12Q8IW75 414 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 C17orf47Q8NEP4 570 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 OR6N2Q8NGY6 317 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 OR5J2Q8NH18 312 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 PTPMT1Q8WUK0 201 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 DEFB126Q9BYW3 111 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 TGIF2Q9GZN2 237 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 BABAM2Q9NXR7 383 aa7.83□□□□□ -1.16
VPS4B-201ENST00000238497 MRPL15Q9P015 296 aaKnown RBP7.83□□□□□ -1.16
VPS4B-201ENST00000238497 TRAV17A0A0B4J275 112 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 TRBV2A0A0J9YWF9 115 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 AK1P00568 194 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 FBXO45P0C2W1 286 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 PSKH1P11801 424 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 EFNA3P52797 238 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF45Q02386 682 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 OXA1LQ15070 435 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 P2RY14Q15391 338 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 NIPAL3Q6P499 406 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 CNIH2Q6PI25 160 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 SLC35D2Q76EJ3 337 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF527Q8NB42 609 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ENKURQ8TC29 256 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 GHSRQ92847 366 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ADAD1Q96M93 576 aaKnown RBP7.82□□□□□ -1.16
VPS4B-201ENST00000238497 RTN4RQ9BZR6 473 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 GALNT9Q9HCQ5 603 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 TRIM36Q9NQ86 728 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 UBQLN4Q9NRR5 601 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 NDUFB11Q9NX14 153 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 NKIRAS2Q9NYR9 191 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 SLC35A3Q9Y2D2 325 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 LSM2Q9Y333 95 aaKnown RBP7.82□□□□□ -1.16
VPS4B-201ENST00000238497 A0A0B4J2E0 115 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 A0A1B0GX12 115 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ANKRD33BA6NCL7 494 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ACOD1A6NK06 481 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 EIF1AYO14602 144 aaKnown RBP7.82□□□□□ -1.16
VPS4B-201ENST00000238497 RNF13O43567 381 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 MT-ND5P03915 603 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 PIPP12273 146 aaPredicted RBP7.82□□□□□ -1.16
VPS4B-201ENST00000238497 UGT2B10P36537 528 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 HSD17B7P56937 341 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 PLAURQ03405 335 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ACER2Q5QJU3 275 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 Q6ZS92 163 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 GDPD3Q7L5L3 318 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 GID4Q8IVV7 300 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 RDH10Q8IZV5 341 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 ZNRF4Q8WWF5 429 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 CAPSLQ8WWF8 208 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 CTHRC1Q96CG8 243 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 KTI12Q96EK9 354 aaPredicted RBP7.82□□□□□ -1.16
VPS4B-201ENST00000238497 OR1F2PQ96R84 312 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms