RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OR8K3Q8NH51 312 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 HOXB13Q92826 284 aaPredicted RBP14.12□□□□□ -0.15
DDX55-201ENST00000238146 RSPH9Q9H1X1 276 aaPredicted RBP14.12□□□□□ -0.15
DDX55-201ENST00000238146 ZNF337Q9Y3M9 751 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 CHD7Q9P2D1 2997 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 PRAMEF2O60811 474 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 CD3DP04234 171 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 GLULP15104 373 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 RAB3AP20336 220 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 RPS4XP62701 263 aaKnown RBP14.12□□□□□ -0.15
DDX55-201ENST00000238146 ZNF550Q7Z398 422 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 LINC00518Q8N0U6 118 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 CAMKVQ8NCB2 501 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 CLRN3Q8NCR9 226 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 OR10K1Q8NGX5 313 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 DUSP19Q8WTR2 217 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 ST8SIA2Q92186 375 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 DVL3Q92997 716 aaPredicted RBP14.12□□□□□ -0.15
DDX55-201ENST00000238146 SLC22A18Q96BI1 424 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 APOOQ9BUR5 198 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 SLC6A15Q9H2J7 730 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 EXO5Q9H790 373 aa14.12□□□□□ -0.15
DDX55-201ENST00000238146 TRBV5-7A0A0A0MS05 114 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 FAM74A7A6NL05 159 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 OR4C45A6NMZ5 311 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 GRXCR1A8MXD5 290 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 ACHEP22303 614 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 SCAND1P57086 179 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 FAM74A3Q4VXF1 159 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 FAM74A1Q5RGS3 127 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 NKAIN2Q5VXU1 208 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 ZNF595Q8IYB9 648 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 TMEM106AQ96A25 262 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 LRRC46Q96FV0 321 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 RBM18Q96H35 190 aaKnown RBP14.11□□□□□ -0.15
DDX55-201ENST00000238146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.11□□□□□ -0.15
DDX55-201ENST00000238146 SLC6A5Q9Y345 797 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 TRAV18A0A075B6X5 111 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 TNFSF14O43557 240 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 EIF4E2O60573 245 aaKnown RBP14.11□□□□□ -0.15
DDX55-201ENST00000238146 PDGFRLQ15198 375 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 LY6G6FQ5SQ64 297 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 FIGLAQ6QHK4 219 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.11□□□□□ -0.15
DDX55-201ENST00000238146 OR8S1Q8NH09 359 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 ZNF417Q8TAU3 575 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 ANKRD9Q96BM1 317 aaPredicted RBP14.11□□□□□ -0.15
DDX55-201ENST00000238146 DNTTIP1Q9H147 329 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 RASL12Q9NYN1 266 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 DPP7Q9UHL4 492 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 MRTO4Q9UKD2 239 aaKnown RBP14.11□□□□□ -0.15
DDX55-201ENST00000238146 SPACA6W5XKT8 324 aa14.11□□□□□ -0.15
DDX55-201ENST00000238146 A0A1W2PQU0 124 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 H0YGG7 62 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 MGMTP16455 207 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 ARHGDIBP52566 201 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 ARF3P61204 181 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 RPS21P63220 83 aaKnown RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 DEFA5Q01523 94 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 KCNAB1Q14722 419 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 GRM7Q14831 915 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 ZNF546Q86UE3 836 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 EXD3Q8N9H8 876 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 CLEC1AQ8NC01 280 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 GPX7Q96SL4 187 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 SLC17A9Q9BYT1 436 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 ALX4Q9H161 411 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 BARX1Q9HBU1 254 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 TBC1D3IA0A087WXS9 549 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 BLOC1S5-TXNDC5H3BN57 136 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 DCTN6O00399 190 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 AQP2P41181 271 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 PRPS1P60891 318 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 EIF2B5Q13144 721 aaKnown RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 KIR2DS3Q14952 304 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 ODF4Q2M2E3 257 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 OR2G2Q8NGZ5 317 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 ASB13Q8WXK3 278 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 WDR13Q9H1Z4 485 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 C1orf198Q9H425 327 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 KCNK15Q9H427 330 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 ZNF230Q9UIE0 474 aaPredicted RBP14.1□□□□□ -0.15
DDX55-201ENST00000238146 IKZF2Q9UKS7 526 aa14.1□□□□□ -0.15
DDX55-201ENST00000238146 OR6C74A6NCV1 312 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 PCP4L1A6NKN8 68 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 MPTX1A8MV57 137 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 ZNF254O75437 659 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 ITGB2P05107 769 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 UBBP0CG47 229 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 UBCP0CG48 685 aaKnown RBP14.09□□□□□ -0.15
DDX55-201ENST00000238146 S1PR1P21453 382 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 C5AR1P21730 350 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 PRSS3P35030 304 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 POU3F4P49335 361 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 FNTBP49356 437 aa14.09□□□□□ -0.15
DDX55-201ENST00000238146 RPS27AP62979 156 aaKnown RBP14.09□□□□□ -0.15
DDX55-201ENST00000238146 UBA52P62987 128 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms