RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CENPBD1B2RD01 187 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 CDC42EP2O14613 210 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 MYL12BO14950 172 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 NOL3O60936 208 aaKnown RBP9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 GFRA1P56159 465 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 KLHL22Q53GT1 634 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 TMEM154Q6P9G4 183 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 COMMD2Q86X83 199 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 SNX33Q8WV41 574 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZFP3Q96NJ6 502 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC22A31A6NKX4 558 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 PRSS23O95084 383 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 SPARCP09486 303 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 CD79AP11912 226 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 UQCRC1P31930 480 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 ERI1Q8IV48 349 aaKnown RBP9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 ST6GALNAC3Q8NDV1 305 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 DHRS1Q96LJ7 313 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 NPAS1Q99742 590 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLCO5A1Q9H2Y9 848 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 IGKV1D-42A0A075B6H8 117 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 FAM90A27PA6NNH2 459 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 H0YJX3 145 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 EGR4Q05215 589 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 FAHD1Q6P587 224 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF813Q6ZN06 617 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 CLDN22Q8N7P3 220 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 THEM6Q8WUY1 208 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 KLHDC3Q9BQ90 382 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 ERRFI1Q9UJM3 462 aaPredicted RBP9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 PCDHGB1Q9Y5G3 927 aa9.94□□□□□ -0.82
TNFAIP3-201ENST00000237289 CLIC3O95833 236 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 QDPRP09417 244 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 CSNK2BP67870 215 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 PPP2R2BQ00005 443 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 Q6ZPB1 254 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 MUS81Q96NY9 551 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 SRXN1Q9BYN0 137 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 IL20Q9NYY1 176 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 MED12Q93074 2177 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 FAM183AA6NL82 134 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 VSTM5A8MXK1 200 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 IGFBP1P08833 259 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 CCNOP22674 350 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 POLR2IP36954 125 aaKnown RBP9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 APOFQ13790 326 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 THEM4Q5T1C6 240 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 FAM214BQ7L5A3 538 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 ALG12Q9BV10 488 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 NGBQ9NPG2 151 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 KCNJ16Q9NPI9 418 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 ERGIC3Q9Y282 383 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 GGT2P36268 569 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 MRPL49Q13405 166 aaKnown RBP9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 CRMP1Q14194 572 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 LAMP5Q9UJQ1 280 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 MYRFQ9Y2G1 1151 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 LRCH1Q9Y2L9 728 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 IGF2P01344 180 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 THY1P04216 161 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 HIST1H1CP16403 213 aaKnown RBP9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 NUDT6P53370 316 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 ACSF3Q4G176 576 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 ANKRD34AQ69YU3 496 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 BEND4Q6ZU67 534 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC16A14Q7RTX9 510 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR51G2Q8NGK0 314 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 RNF138Q8WVD3 245 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 SEC14L4Q9UDX3 406 aa9.93□□□□□ -0.82
TNFAIP3-201ENST00000237289 DAPL1A0PJW8 107 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 AQP8O94778 261 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 RAB36O95755 333 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 GYPBP06028 91 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 ASAH2BP0C7U1 165 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 CTSSP25774 331 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 ADAM8P78325 824 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 TMEM53Q6P2H8 277 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 ADPRHL1Q8NDY3 354 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 ALKBH3Q96Q83 286 aaPredicted RBP9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 TBX5Q99593 518 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 B8ZZF3 427 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF670-ZNF695F2Z2N8 137 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 IMPA2O14732 288 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 SMAD9O15198 467 aaKnown RBP9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 EFNA2O43921 213 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 PYCR1P32322 319 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 NAA10P41227 235 aaPredicted RBP9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC15A1P46059 708 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 PCBD1P61457 104 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 KEAP1Q14145 624 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 PDK3Q15120 406 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 CD300LDQ6UXZ3 194 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 EPHX4Q8IUS5 362 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 KISS1RQ969F8 398 aaPredicted RBP9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 TXNDC15Q96J42 360 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 FOXN4Q96NZ1 517 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms