RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 OR6S1Q8NH40 331 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 HSD17B8Q92506 261 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 SYT4Q9H2B2 425 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF275Q9NSD4 429 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 CTSFQ9UBX1 484 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 SEC16AO15027 2179 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 SPAG17Q6Q759 2223 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 TMED7-TICAM2A0A0A6YYA0 188 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 A0A0B4J203 849 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 C17orf51A8MQB3 221 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 SUSD5O60279 629 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 AKR7A3O95154 331 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 RAF1P04049 648 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 MYF5P13349 255 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 SLC26A5P58743 744 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 RNF4P78317 190 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 MRPS15P82914 257 aaKnown RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 LANCL3Q6ZV70 420 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 ABCA7Q8IZY2 2146 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 YIPF7Q8N8F6 280 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 OR5AK2Q8NH90 309 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF671Q8TAW3 534 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF519Q8TB69 540 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 LGALS14Q8TCE9 139 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 STT3BQ8TCJ2 826 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 INTS14Q96SY0 518 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 VSX1Q9NZR4 365 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 PPIEQ9UNP9 301 aaKnown RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 TMED7Q9Y3B3 224 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 V9GY05 133 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 TVP23AA6NH52 213 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 OR4C45A6NMZ5 311 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 H7C1C5 153 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 ARHGEF9O43307 516 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 NUDT14O95848 222 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 IGHMP01871 453 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 ANKRD34CP0C6C1 535 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 DPP4P27487 766 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 ARRB1P49407 418 aaPredicted RBP14.62□□□□□ -0.07
UBE3D-201ENST00000237186 BLVRAP53004 296 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 RAB25P57735 213 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 RPL27P61353 136 aaKnown RBP14.62□□□□□ -0.07
UBE3D-201ENST00000237186 LCN6P62502 163 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 CD83Q01151 205 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 DYRK1AQ13627 763 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 EFR3AQ14156 821 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 TMEM53Q6P2H8 277 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 FDX2Q6P4F2 183 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 DPY19L4Q7Z388 723 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 CMTM4Q8IZR5 234 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 TOMM5Q8N4H5 51 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 NFAM1Q8NET5 270 aaPredicted RBP14.62□□□□□ -0.07
UBE3D-201ENST00000237186 OTOSQ8NHW6 89 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 SMIM4Q8WVI0 70 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 CCDC74AQ96AQ1 378 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 DPAGT1Q9H3H5 408 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 TXNIPQ9H3M7 391 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 NIPAL2Q9H841 368 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 TAS2R10Q9NYW0 307 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 COPZ2Q9P299 210 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 B9D1Q9UPM9 204 aa14.62□□□□□ -0.07
UBE3D-201ENST00000237186 C7orf66A4D0T2 115 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 PRSS37A4D1T9 235 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 XKRYO14609 159 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 KHNYNO15037 678 aaKnown RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 OR2T1O43869 369 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 WISP1O95388 367 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 CALCBP10092 127 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ERP29P30040 261 aaKnown RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 RAG2P55895 527 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 DLX5P56178 289 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ACY1Q03154 408 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ACKR1Q16570 336 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 C1orf140Q5VVS0 124 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 STAC2Q6ZMT1 411 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF574Q6ZN55 896 aaPredicted RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 PM20D2Q8IYS1 436 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 APCDD1LQ8NCL9 501 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 OR6N2Q8NGY6 317 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 OR2G2Q8NGZ5 317 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 DUSP19Q8WTR2 217 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 METTL21AQ8WXB1 218 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 SLITRK2Q9H156 845 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 TSPAN10Q9H1Z9 355 aaPredicted RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 PLEKHA1Q9HB21 404 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 NUBP2Q9Y5Y2 271 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 TRBV5-7A0A0A0MS05 114 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 TMEM212A6NML5 194 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 SULT1B1O43704 296 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 TPPPO94811 219 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 RPP14O95059 124 aaKnown RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ONECUT2O95948 504 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 DCNP07585 359 aaKnown RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 CD3GP09693 182 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 SRP9P49458 86 aaKnown RBP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 GZMKP49863 264 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 DGCR2P98153 550 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 KRT74Q7RTS7 529 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 KANSL1Q7Z3B3 1105 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 SIAH3Q8IW03 269 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms