RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MDC1Q14676 2089 aaKnown RBP12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 CACNB4O00305 520 aaPredicted RBP12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 SPINT1O43278 529 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 ADRB3P13945 408 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 NDUFB7P17568 137 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 SHC2P98077 582 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 BDH1Q02338 343 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 MICBQ29980 383 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 UBE2NLQ5JXB2 153 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 DHRS7BQ6IAN0 325 aaPredicted RBP12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 RNF44Q7L0R7 432 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 PXKQ7Z7A4 578 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 COX18Q8N8Q8 333 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2A1Q8NGT9 310 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 MICU1Q9BPX6 476 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 IL21RQ9HBE5 538 aa12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 APOBEC3BQ9UH17 382 aaKnown RBP12.96□□□□□ -0.33
PCDHB3-201ENST00000231130 C4orf47A7E2U8 309 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 RPN2P04844 631 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 H2AFB1P0C5Y9 115 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 APEHP13798 732 aaKnown RBP12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 DLSTP36957 453 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 AQP2P41181 271 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF136P52737 540 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 NNATQ16517 81 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF658BQ4V348 819 aaPredicted RBP12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 LIN54Q6MZP7 749 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 RD3Q7Z3Z2 195 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 NUBPLQ8TB37 319 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNRF4Q8WWF5 429 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 ARL11Q969Q4 196 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 TSSK2Q96PF2 358 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 NMNAT3Q96T66 252 aa12.96□□□□□ -0.34
PCDHB3-201ENST00000231130 PRRT4C9JH25 899 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 KLF4O43474 513 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CLN5O75503 358 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CLEC3AO75596 197 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 ITPKBP27987 946 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 MPGP29372 298 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 DHODHQ02127 395 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CBFBQ13951 182 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CDK5R1Q15078 307 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 TAF8Q7Z7C8 310 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 OR4E2Q8NGC2 313 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 NRIP3Q9NQ35 241 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 OR2S2Q9NQN1 319 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 M0R036 132 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 GMFGO60234 142 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SNAPC5O75971 98 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SNRNP70P08621 437 aaKnown RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 FBP1P09467 338 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CPN1P15169 458 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 P2RX1P51575 399 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 DEFB103AP81534 67 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM200AQ86VY9 491 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 RAB42Q8N4Z0 105 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 RNASE11Q8TAA1 199 aaKnown RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SLC25A38Q96DW6 304 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SDF2Q99470 211 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 CHST6Q9GZX3 395 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 TCF7L1Q9HCS4 588 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 ST6GALNAC2Q9UJ37 374 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SIGLEC7Q9Y286 467 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SCN5AQ14524 2016 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 DENND4CQ5VZ89 1909 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SZT2Q5T011 3432 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SDK1Q7Z5N4 2213 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 PIN1P1O15428 100 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 BTF3P20290 206 aaKnown RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 NDUFS1P28331 727 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 P2RY4P51582 365 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 MFSD12Q6NUT3 480 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 FAM199XQ6PEV8 388 aaPredicted RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 NRSN1Q8IZ57 195 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF511Q8NB15 262 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 SMIM19Q96E16 107 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 NAA11Q9BSU3 229 aaPredicted RBP12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 ULBP3Q9BZM4 244 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 PRO1933Q9H354 126 aa12.95□□□□□ -0.34
PCDHB3-201ENST00000231130 C17orf113A0A1B0GUU1 675 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 NAP1L6A6NFF2 107 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 URADA6NGE7 173 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 IFITM5A6NNB3 132 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 GRXCR1A8MXD5 290 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 TBX19O60806 448 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ACTL6AO96019 429 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 PRNPP04156 253 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ADH6P28332 368 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms