RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 C9orf106Q8NAJ2 232 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 NPEPL1Q8NDH3 523 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 OR8J1Q8NGP2 316 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 RHOXF1Q8NHV9 184 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 FBLIM1Q8WUP2 373 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 UBE2FQ969M7 185 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 RASD2Q96D21 266 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
SEC61B-201ENST00000223641 SLC38A2Q96QD8 506 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 KCNK17Q96T54 332 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 PRRG3Q9BZD7 231 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 FN3KQ9H479 309 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 ZNF226Q9NYT6 803 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 TVP23BQ9NYZ1 205 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 KLHL21Q9UJP4 597 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 RCE1Q9Y256 329 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 ALPK2Q86TB3 2170 aa12.47□□□□□ -0.41
SEC61B-201ENST00000223641 A6NIZ1 184 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 AHCYL1O43865 530 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 PRKYO43930 277 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SERPINI2O75830 405 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 TOXO94900 526 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 PGA3P0DJD8 388 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 ACADSP16219 412 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 NOS3P29474 1203 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 CEACAM8P31997 349 aaPredicted RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 ACVR1BP36896 505 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 CDKN2AP42771 156 aaKnown RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 BIDP55957 195 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 CLDN17P56750 224 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 RAP1BP61224 184 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SNRPGP62308 76 aaKnown RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 RAP1AP62834 184 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 RUNX1T1Q06455 604 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 KRR1Q13601 381 aaKnown RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 MELKQ14680 651 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SNAPC1Q16533 368 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 HIST3H3Q16695 136 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SLC25A30Q5SVS4 291 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SLC35F1Q5T1Q4 408 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 EEF1A1P5Q5VTE0 462 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 OR2A2Q6IF42 318 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 B3GNT6Q6ZMB0 384 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 HDDC2Q7Z4H3 204 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 P4HA3Q7Z4N8 544 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 ADCK1Q86TW2 530 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 TMEM123Q8N131 208 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SLC37A3Q8NCC5 494 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SETD9Q8NE22 299 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 FAM81AQ8TBF8 368 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 HDAC2Q92769 488 aaKnown RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 SLC25A44Q96H78 314 aaPredicted RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 OR2M2Q96R28 347 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 APOL4Q9BPW4 351 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 VSX1Q9NZR4 365 aaPredicted RBP12.46□□□□□ -0.41
SEC61B-201ENST00000223641 EMC3Q9P0I2 261 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 RNF6Q9Y252 685 aa12.46□□□□□ -0.41
SEC61B-201ENST00000223641 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.42
SEC61B-201ENST00000223641 PRSS37A4D1T9 235 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 OR6C68A6NDL8 312 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 B8ZZF3 427 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 ARHGEF9O43307 516 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 MPZL2O60487 215 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 TRMUO75648 421 aaKnown RBP12.45□□□□□ -0.42
SEC61B-201ENST00000223641 IFNGP01579 166 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 CRHP06850 196 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 STSP08842 583 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 AGTR1P30556 359 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 CA7P43166 264 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 ZNF133P52736 654 aaPredicted RBP12.45□□□□□ -0.42
SEC61B-201ENST00000223641 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC61B-201ENST00000223641 ITGADQ13349 1161 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
SEC61B-201ENST00000223641 CRMP1Q14194 572 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 TMEM201Q5SNT2 666 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 FAM214BQ7L5A3 538 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 MCEMP1Q8IX19 187 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 C8orf59Q8N0T1 100 aaPredicted RBP12.45□□□□□ -0.42
SEC61B-201ENST00000223641 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 TMEM163Q8TC26 289 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 PTP4A1Q93096 173 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 LRR1Q96L50 414 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 ALG12Q9BV10 488 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 NMNAT2Q9BZQ4 307 aa12.45□□□□□ -0.42
SEC61B-201ENST00000223641 HINT3Q9NQE9 182 aaKnown RBP12.45□□□□□ -0.42
SEC61B-201ENST00000223641 PARPBPQ9NWS1 579 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms