RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OR51J1Q9H342 316 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 CCDC86Q9H6F5 360 aaKnown RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 FBXO8Q9NRD0 319 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 PFDN2Q9UHV9 154 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF337Q9Y3M9 751 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 V9GY05 133 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF593O00488 134 aaPredicted RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SIX6O95475 246 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 MPIG6BO95866 241 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 POU4F2Q12837 409 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 OCLNQ16625 522 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SLC25A35Q3KQZ1 300 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF362Q5T0B9 420 aaPredicted RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 QSOX2Q6ZRP7 698 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 RAB11FIP2Q7L804 512 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SIAH3Q8IW03 269 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 SPERTQ8NA61 448 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 OR4C15Q8NGM1 316 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 GOT1L1Q8NHS2 421 aaPredicted RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 DERL3Q96Q80 235 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
CHPF2-201ENST00000035307 PARPBPQ9NWS1 579 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 TMEM14AQ9Y6G1 99 aa11.02□□□□□ -0.65
CHPF2-201ENST00000035307 OR2AT4A6NND4 320 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 SLC33A1O00400 549 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 TBX6O95947 436 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 MVDP53602 400 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 DGCR2P98153 550 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 MEP1BQ16820 701 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 SLC18B1Q6NT16 456 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CAMKMTQ7Z624 323 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 KIF18BQ86Y91 864 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 GPR148Q8TDV2 347 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ACOT12Q8WYK0 555 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 RNF170Q96K19 258 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 A0A1B0GV50 99 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 E9PI62 339 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 GPLD1P80108 840 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 LIPNQ5VXI9 398 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 WBP2NLQ6ICG8 309 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 KIAA1958Q8N8K9 716 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 HCAR1Q9BXC0 346 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 NT5DC2Q9H857 520 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 C19orf25Q9UFG5 118 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CGGBP1Q9UFW8 167 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 NSG1A0A0A6YYJ2 146 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 SURF4O15260 269 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 FABP7O15540 132 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 NUDT21O43809 227 aaKnown RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 NSA2O95478 260 aaKnown RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 HRGP04196 525 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CSF3P09919 207 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 LIMS3P0CW19 117 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 LIMS4P0CW20 117 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 GDNFP39905 211 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 SELENBP1Q13228 472 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 RAB11BQ15907 218 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 OR10K2Q6IF99 312 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF584Q8IVC4 421 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CLDN22Q8N7P3 220 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF717Q9BY31 904 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 METTL17Q9H7H0 456 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF160Q9HCG1 818 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 SPEF1Q9Y4P9 236 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 OTOGLQ3ZCN5 2332 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 C2orf16Q68DN1 1984 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CHP2O43745 196 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ZGLP1P0C6A0 271 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ARSBP15848 533 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 MRPL19P49406 292 aaKnown RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 STARD6P59095 220 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 LRRC28Q86X40 367 aaPredicted RBP11.01□□□□□ -0.65
CHPF2-201ENST00000035307 IQCF2Q8IXL9 164 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 DTWD2Q8NBA8 298 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 VN1R1Q9GZP7 353 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 DUSP22Q9NRW4 184 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 LUZP4Q9P127 313 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 SRPK3Q9UPE1 567 aa11.01□□□□□ -0.65
CHPF2-201ENST00000035307 CHD8Q9HCK8 2581 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 COL4A3Q01955 1670 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 TMEM269A0A1B0GVZ9 245 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 CREBL2O60519 120 aaPredicted RBP11□□□□□ -0.65
CHPF2-201ENST00000035307 SFTPBP07988 381 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 ZNF43P17038 809 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 CSF2RBP32927 897 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 VEGFCP49767 419 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 ARHGAP11BQ3KRB8 267 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 CBLN3Q6UW01 205 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 WDR34Q96EX3 536 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 PGAM5Q96HS1 289 aa11□□□□□ -0.65
CHPF2-201ENST00000035307 SEC22CQ9BRL7 303 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms