RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TRIM63Q969Q1 353 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 UPRTQ96BW1 309 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 FOXN4Q96NZ1 517 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 TSPAN10Q9H1Z9 355 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 SYNDIG1Q9H7V2 258 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 BRD7Q9NPI1 651 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 ING1Q9UK53 422 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 MOKQ9UQ07 419 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 NPFFR2Q9Y5X5 522 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 U3KQA8 63 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 TMED7-TICAM2A0A0A6YYA0 188 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 A0A1B0GTH9 108 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 FAM240BA0A1B0GVZ2 78 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 A0A1W2PQM1 296 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 HMX3A6NHT5 357 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 EEF1E1O43324 174 aaKnown RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 SLC25A12O75746 678 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 EPHA8P29322 1005 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 CCL7P80098 99 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 RNASE12Q5GAN4 147 aaKnown RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 UNQ9370/PRO34162Q6UXP9 181 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 CDC20BQ86Y33 519 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 GPR119Q8TDV5 335 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 MRPL48Q96GC5 212 aaKnown RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 ZC3HAV1LQ96H79 300 aaKnown RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 DERL3Q96Q80 235 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 GFI1Q99684 422 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 NPAS1Q99742 590 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 THAP7Q9BT49 309 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-229ENST00000641891 BEX2Q9BXY8 128 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 OR11A1Q9GZK7 315 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 TMED7Q9Y3B3 224 aa15.36■□□□□ 0.05
PHGDH-229ENST00000641891 UPK3AO75631 287 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 GATBO75879 557 aaKnown RBP15.35■□□□□ 0.05
PHGDH-229ENST00000641891 CD1AP06126 327 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 PRKCAP17252 672 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 P2RX1P51575 399 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 AGFG1P52594 562 aaKnown RBP15.35■□□□□ 0.05
PHGDH-229ENST00000641891 FBXW4P57775 412 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 EMC4Q5J8M3 183 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 KANSL1Q7Z3B3 1105 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 ANKRD37Q7Z713 158 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 ADGRG3Q86Y34 549 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 YIPF7Q8N8F6 280 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 OR6N2Q8NGY6 317 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 CDX2Q99626 313 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-229ENST00000641891 PRDM6Q9NQX0 595 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 SRPK3Q9UPE1 567 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 N6AMT1Q9Y5N5 214 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 RENP00797 406 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 AHCYP23526 432 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 POLR2HP52434 150 aaKnown RBP15.35■□□□□ 0.05
PHGDH-229ENST00000641891 TATDN3Q17R31 274 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 LIPNQ5VXI9 398 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 PWWP2BQ6NUJ5 590 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 NUP54Q7Z3B4 507 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 APCDD1LQ8NCL9 501 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 DUSP18Q8NEJ0 188 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 OR2T4Q8NH00 348 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 SLC7A6Q92536 515 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 RFT1Q96AA3 541 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 MAP6Q96JE9 813 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 TGIF2Q9GZN2 237 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 ANKRD10Q9NXR5 420 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 ZNF281Q9Y2X9 895 aa15.35■□□□□ 0.05
PHGDH-229ENST00000641891 ZNF879B4DU55 563 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 SIGLEC6O43699 453 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 GPRIN2O60269 458 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 ABHD16AO95870 558 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 HEXBP07686 556 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 SRMP19623 302 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 DDOSTP39656 456 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 SRP9P49458 86 aaKnown RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 GPR176Q14439 515 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 COL28A1Q2UY09 1125 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 NKAIN1Q4KMZ8 207 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 EEF1A1P5Q5VTE0 462 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 LRRC69Q6ZNQ3 347 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 OVCH1Q7RTY7 1134 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 DPY19L4Q7Z388 723 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 ZNF486Q96H40 463 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 ZCCHC4Q9H5U6 513 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 DDX28Q9NUL7 540 aaKnown RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 TAS2R10Q9NYW0 307 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 LAMP5Q9UJQ1 280 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 ALG5Q9Y673 324 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 OR6C70A6NIJ9 312 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 IL11P20809 199 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 NR0B2Q15466 257 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 HES5Q5TA89 166 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 GPR139Q6DWJ6 353 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 MAMDC2Q7Z304 686 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 FAM220AQ7Z4H9 259 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 RABEPKQ7Z6M1 372 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 IZUMO1Q8IYV9 350 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 NFAM1Q8NET5 270 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 LGALS14Q8TCE9 139 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms