RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CPAMD8Q8IZJ3 1885 aa11.78□□□□□ -0.52
PHGDH-221ENST00000641573 LRBAP50851 2863 aa11.77□□□□□ -0.52
PHGDH-221ENST00000641573 TEX13CA0A0J9YWL9 993 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 OR2M5A3KFT3 312 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 C11orf98E9PRG8 122 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 RNF13O43567 381 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 INMTO95050 263 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 RFPL3SP0C7P2 107 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 SHC1P29353 583 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 MTNR1AP48039 350 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 RIPPLY3P57055 190 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 OR2B6P58173 313 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 RAB40BQ12829 278 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 KLRB1Q12918 225 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 MYBPHQ13203 477 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 TOMM20Q15388 145 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 TBCEQ15813 527 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-221ENST00000641573 DEFB109BQ30KR1 87 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 TMEM176BQ3YBM2 270 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-221ENST00000641573 EMC4Q5J8M3 183 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 GPR139Q6DWJ6 353 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 GTF2IRD2BQ6EKJ0 949 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 SLC25A25Q6KCM7 469 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 H1FNTQ75WM6 255 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-221ENST00000641573 FAM122BQ7Z309 247 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 GTF2IRD2Q86UP8 949 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 SULF2Q8IWU5 870 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 MDS2Q8NDY4 140 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 SSC4DQ8WTU2 575 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 TSPAN32Q96QS1 320 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 OR5B2Q96R09 309 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 PIGQQ9BRB3 760 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 CDCA4Q9BXL8 241 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 RNF32Q9H0A6 362 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 OR51V1Q9H2C8 321 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-221ENST00000641573 FGF20Q9NP95 211 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-221ENST00000641573 CHST11Q9NPF2 352 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 GRHPRQ9UBQ7 328 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 CEPT1Q9Y6K0 416 aa11.77□□□□□ -0.53
PHGDH-221ENST00000641573 A0A1W2PNR3 127 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 CCDC182A6NF36 153 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 H3BSA7 217 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 FZD7O75084 574 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 SERPINI2O75830 405 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 TRAPPC6AO75865 159 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 SEC14L2O76054 403 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 APOL3O95236 402 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 RAB36O95755 333 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 SP1P08047 785 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 CD46P15529 392 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 AHCYP23526 432 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 SDHAP31040 664 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 TTKP33981 857 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 SFTPDP35247 375 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 CD97P48960 835 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 GP2P55259 537 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 B3GALT5-AS1P59052 145 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 FOXO1Q12778 655 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 ZP4Q12836 540 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 TMED1Q13445 227 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 KRR1Q13601 381 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 KLHL12Q53G59 568 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 UBE2UQ5VVX9 321 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 LEG1Q6P5S2 330 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 JAZF1Q86VZ6 243 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 NPEPL1Q8NDH3 523 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 OR13F1Q8NGS4 319 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 OR14L1PQ8NHC6 308 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 FCGR1BQ92637 280 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 C5orf34Q96MH7 638 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 NMNAT3Q96T66 252 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 DDOQ99489 341 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 OR2B2Q9GZK3 357 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 TAS2R16Q9NYV7 291 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 WARS2Q9UGM6 360 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 ZNF346Q9UL40 294 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 DIMT1Q9UNQ2 313 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 KLF13Q9Y2Y9 288 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 MRPS18CQ9Y3D5 142 aaKnown RBP11.76□□□□□ -0.53
PHGDH-221ENST00000641573 HDGFL3Q9Y3E1 203 aa11.76□□□□□ -0.53
PHGDH-221ENST00000641573 DOCK10Q96BY6 2186 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 OR6C68A6NDL8 312 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 CCDC160A6NGH7 325 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 SLC22A31A6NKX4 558 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 NME2P1O60361 137 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 AKR7A3O95154 331 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 PLGP00747 810 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-221ENST00000641573 PTHP01270 115 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 IGHMP01871 453 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 LCKP06239 509 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 CLUP10909 449 aa11.75□□□□□ -0.53
PHGDH-221ENST00000641573 NME2P22392 152 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms