RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MTCH2Q9Y6C9 303 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 COX11Q9Y6N1 276 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 FLT4P35916 1363 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ATP10AO60312 1499 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 COL4A3Q01955 1670 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ABCB11O95342 1321 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ADGRA3Q8IWK6 1321 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 FER1L4A9Z1Z3 1794 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TRAV24A0A0B4J272 114 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 A0A1W2PR80 420 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 A0A1W2PRG6 482 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TCRBV7S3A2A0A539 114 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 LRP5LA4QPB2 252 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TRABD2BA6NFA1 517 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SLC22A20A6NK97 555 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 C21orf140B9A014 251 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 F5H5T6 163 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 LOC110117498-PIK3R3F6TDL0 507 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 K7EN84 100 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 M0QYV0 167 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 AP4M1O00189 453 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 PLPP3O14495 311 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR7A17O14581 309 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ARPC1BO15143 372 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 SLC16A5O15375 505 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 FGF16O43320 207 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 PRKAB2O43741 272 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 XPNPEP2O43895 674 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 RAD1O60671 282 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 CCDC22O60826 627 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SHOX2O60902 331 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 POP7O75817 140 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 MPZL1O95297 269 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 CNIH1O95406 144 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TTC4O95801 387 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 LATS1O95835 1130 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TIMP1P01033 207 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 VTNP04004 478 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 P04436 131 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 S100A8P05109 93 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ISG15P05161 165 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 C1GALT1C1LP0DN25 315 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 FCER1AP12319 257 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ZNF35P13682 527 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 HOXB2P14652 356 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 UQCRBP14927 111 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 HIST1H1CP16403 213 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 DPEP1P16444 411 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ENGP17813 658 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 GZMHP20718 246 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ATP6V1B2P21281 511 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 MATN1P21941 496 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 LHCGRP22888 699 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 GABRR1P24046 479 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 CALML3P27482 149 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ADORA1P30542 326 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SRD5A2P31213 254 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 HPCAL1P37235 193 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NBL1P41271 181 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 RPL21P46778 160 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 P2RY1P47900 373 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TTPAP49638 278 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 EIF2B2P49770 351 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 DAP3P51398 398 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 LBX1P52954 281 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 MLLT10P55197 1068 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 RPS15AP62244 130 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 IL5RAQ01344 420 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 EWSR1Q01844 656 aaKnown RBP eCLIP2.67□□□□□ -1.98
VIM-210ENST00000637053 NHLH2Q02577 135 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 PIGFQ07326 219 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 PUDPQ08623 228 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SKP2Q13309 424 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 DNASE1L3Q13609 305 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 MAD2L1BPQ15013 274 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 TRIP13Q15645 432 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 KCNJ8Q15842 424 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 MAPK14Q16539 360 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ZNF74Q16587 644 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 RPEL1Q2QD12 228 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 GPR33Q49SQ1 333 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TNFAIP8L3Q5GJ75 292 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ARL13AQ5H913 290 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 FGD3Q5JSP0 725 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NSUN5P2Q63ZY6 315 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 WDR25Q64LD2 544 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 OR8G2PQ6IF36 304 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NIPAL1Q6NVV3 410 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ZNF774Q6NX45 483 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 PNCKQ6P2M8 343 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ENPP6Q6UWR7 440 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 UNQ6126/PRO20091Q6UXV3 157 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 KYAT3Q6YP21 454 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 Q6ZSR3 168 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 MDGA2Q7Z553 956 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 IFT20Q8IY31 132 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 FAM109AQ8N4B1 249 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 DNAJC22Q8N4W6 341 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 FITM2Q8N6M3 262 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 LRRC52Q8N7C0 313 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms