RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 GAAP10253 952 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 MAP3K8P41279 467 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 GRK6P43250 576 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 PUDPQ08623 228 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 POU4F2Q12837 409 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 GRM7Q14831 915 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 WDR45BQ5MNZ6 344 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ALKAL2Q6UX46 152 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 CDH24Q86UP0 819 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ZDHHC1Q8WTX9 485 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 LOC100509620A0A075B734 347 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 MEIKINA0A087WXM9 373 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SERINC4A6NH21 518 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 KCNJ13O60928 360 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SULT1A3P0DMM9 295 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SULT1A4P0DMN0 295 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 LIPCP11150 499 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 P2RX1P51575 399 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 HSF2Q03933 536 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 ALG10Q5BKT4 473 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF426Q9BUY5 554 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 OR10A5Q9H207 317 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SOHLH2Q9NX45 425 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 B3GNT2Q9NY97 397 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 HAO2Q9NYQ3 351 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 RDH8Q9NYR8 311 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 MRM2Q9UI43 246 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SERTAD3Q9UJW9 196 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 A0A087WUJ7 227 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 ARPC5O15511 151 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 CSN2P05814 226 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 DPP4P27487 766 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 OR1D4P47884 311 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 PTH2RP49190 550 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 RAB38P57729 211 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 KIAA1024LP59773 190 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 C19orf57Q0VDD7 668 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 TOMM34Q15785 309 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 MDGA2Q7Z553 956 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 OR5M1Q8NGP8 315 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 NSMAFQ92636 917 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 RTN4RQ9BZR6 473 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 KLHL9Q9P2J3 617 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 FREM3P0C091 2139 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 A0A1B0GVI7 797 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 G3V3Q6 166 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 AIPO00170 330 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SIGLEC5O15389 551 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 AKR7A3O95154 331 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SIGLEC14Q08ET2 396 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 PCGF3Q3KNV8 242 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 PWWP2BQ6NUJ5 590 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 PM20D2Q8IYS1 436 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 TMEM138Q9NPI0 162 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC22A13Q9Y226 551 aa12.78□□□□□ -0.36
CACNA1A-228ENST00000636610 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 DENND4AQ7Z401 1863 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 FXYD6-FXYD2A0A087WZ82 144 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 PYCARD-AS1I3L0S3 204 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 LTBQ06643 244 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 CBFBQ13951 182 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 SMAD2Q15796 467 aaKnown RBP12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 MEP1BQ16820 701 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 LINC01590Q5TEZ4 76 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 SHISA6Q6ZSJ9 500 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF550Q7Z398 422 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 FAM220AQ7Z4H9 259 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 SLITRK4Q8IW52 837 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 OR6V1Q8N148 313 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 MED30Q96HR3 178 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 SORCS2Q96PQ0 1159 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 FXYD6Q9H0Q3 95 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 KCNG2Q9UJ96 466 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 PIAS3Q9Y6X2 628 aa12.77□□□□□ -0.36
CACNA1A-228ENST00000636610 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 CCKBRP32239 447 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 HTR4Q13639 388 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 ETFDHQ16134 617 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 NKAIN2Q5VXU1 208 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 DPY19L2P2Q6ZN68 376 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 TSEN15Q8WW01 171 aaKnown RBP12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 SFXN2Q96NB2 322 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms