RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LILRA4P59901 499 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PAFAH1B2P68402 229 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SPHARQ15513 63 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR2B11Q5JQS5 317 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PLXDC2Q6UX71 529 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 VSIG10LQ86VR7 867 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 JOSD2Q8TAC2 188 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PRAP1Q96NZ9 151 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PINK1Q9BXM7 581 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 COMMD5Q9GZQ3 224 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PPIL3Q9H2H8 161 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SLCO5A1Q9H2Y9 848 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SEBOXQ9HB31 216 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NAGKQ9UJ70 344 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 FBXL4Q9UKA2 621 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 STXBP5LQ9Y2K9 1186 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 KIAA1210Q9ULL0 1709 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 EIF1BO60739 113 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR7C1O76099 320 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 GLAP06280 429 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MMP7P09237 267 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PPP1CCP36873 323 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MMP15P51511 669 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SSR4P51571 173 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RBMS2Q15434 407 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 INPP5JQ15735 1006 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MLF2Q15773 248 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ACOT6Q3I5F7 207 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PRAMEF19Q5SWL8 479 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DHRS7BQ6IAN0 325 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 KLHDC8BQ8IXV7 354 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR51A2Q8NGJ7 313 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 COQ4Q9Y3A0 265 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NBASA2RRP1 2371 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 H7BY64 318 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 F10P00742 488 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 RABGGTBP53611 331 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 EMP1P54849 157 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM115Q12893 351 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OPN5Q6U736 354 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR5W2Q8NH69 310 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SYNPRQ8TBG9 265 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SECTM1Q8WVN6 248 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DLL4Q9NR61 685 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ENPP5Q9UJA9 477 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GAB2Q9UQC2 676 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SOX21Q9Y651 276 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ADM5C9JUS6 153 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 G3V3Q6 166 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 IGKV5-2P06315 115 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TPOP07202 933 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SMIM6P0DI80 62 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 C21orf33P30042 268 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GRPRP30550 384 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GDF10P55107 478 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ID2Q02363 134 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PIWIL3Q7Z3Z3 882 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 C17orf78Q8N4C9 275 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SLC15A4Q8N697 577 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR52R1Q8NGF1 315 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CD99L2Q8TCZ2 262 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CDCA3Q99618 268 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GPA33Q99795 319 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 BCL7BQ9BQE9 202 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 NECAP2Q9NVZ3 263 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ADGRB2O60241 1585 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SPG11Q96JI7 2443 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DEGS1O15121 323 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GALR3O60755 368 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OPN1SWP03999 348 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 EPXP11678 715 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 EPHA2P29317 976 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 STT3AP46977 705 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CDX1P47902 265 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TCTAP57738 103 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 EXOSC2Q13868 293 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 WBP2NLQ6ICG8 309 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 NPSR1Q6W5P4 371 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CLEC17AQ6ZS10 378 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 BEND2Q8NDZ0 799 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ALG3Q92685 438 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF689Q96CS4 500 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 HHIPL1Q96JK4 782 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PACRGQ96M98 296 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CPPED1Q9BRF8 314 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ULBP2Q9BZM5 246 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SDCBP2Q9H190 292 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF346Q9UL40 294 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ENTPD2Q9Y5L3 495 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PRR36Q9H6K5 1346 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 HSPB6O14558 160 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 BCAT2O15382 392 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TBX19O60806 448 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GSRP00390 522 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SHBGP04278 402 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 HNRNPA1P09651 372 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CPN1P15169 458 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ST6GAL1P15907 406 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 AOC1P19801 751 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms