RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PRR25Q96S07 402 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 TSC22D3Q99576 134 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 SLC35A5Q9BS91 424 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 ALG8Q9BVK2 526 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 BARHL1Q9BZE3 327 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 NAA50Q9GZZ1 169 aaKnown RBP4.34□□□□□ -1.71
SDCBP-213ENST00000630925 LHPPQ9H008 270 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM38AQ9H6F2 299 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 BCAS3Q9H6U6 928 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 NMRAL1Q9HBL8 299 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 KRCC1Q9NPI7 259 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-213ENST00000630925 DUSP22Q9NRW4 184 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 DDX19AQ9NUU7 478 aaKnown RBP4.34□□□□□ -1.71
SDCBP-213ENST00000630925 PILRAQ9UKJ1 303 aa4.34□□□□□ -1.71
SDCBP-213ENST00000630925 A0A1B0GV90 55 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ATP6AP2A0A1C7CYW4 349 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RFPL4AA6NLU0 287 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RFPL4AL1F8VTS6 287 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 M0QZ92 97 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SLC31A1O15431 190 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SERPINB7O75635 380 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 AQP8O94778 261 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 MPZL1O95297 269 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ESRRBO95718 433 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 EML2O95834 649 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 IFNA21P01568 189 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ORM1P02763 201 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 BMP3P12645 472 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 UCHL3P15374 230 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ARSBP15848 533 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 AADACP22760 399 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 LHCGRP22888 699 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SSTR5P35346 364 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 HLCSP50747 726 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF84P51523 738 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TFAMQ00059 246 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ST3GAL3Q11203 375 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 KLRB1Q12918 225 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 GAGE1Q13065 139 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TFDP1Q14186 410 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 MAD2L1BPQ15013 274 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 GPR33Q49SQ1 333 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RBM48Q5RL73 367 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TRIQKQ629K1 86 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 GCNT7Q6ZNI0 430 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 Q7L0L9 218 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 OR2W3Q7Z3T1 314 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RIMKLAQ8IXN7 391 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 KIRREL3Q8IZU9 778 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 LRRC52Q8N7C0 313 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 OR10W1Q8NGF6 305 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 OR4D10Q8NGI6 311 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF398Q8TD17 642 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 BADQ92934 168 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SNX18Q96RF0 628 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RNF2Q99496 336 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 S1PR3Q99500 378 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 AGPAT1Q99943 283 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RNF26Q9BY78 433 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ELOVL4Q9GZR5 314 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SPNS1Q9H2V7 528 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 GAREM1Q9H706 876 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SLC17A5Q9NRA2 495 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SLC2A9Q9NRM0 540 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 C2orf42Q9NWW7 574 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 IL36GQ9NZH8 169 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 BTNL2Q9UIR0 455 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 MRTO4Q9UKD2 239 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TCAF1Q9Y4C2 921 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 MTCH2Q9Y6C9 303 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SCN11AQ9UI33 1791 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 CCDC88AQ3V6T2 1871 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF532Q9HCE3 1301 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 CPSF1Q10570 1443 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 NPIPA5A0A0B4J1W7 369 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 A1L4Q6 167 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 HIDE1A8MVS5 230 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 DISC1C4P0D8 188 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 NPIPA5E9PKD4 350 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 BLOC1S5-TXNDC5H3BN57 136 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SIRPB1O00241 398 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 AZIN1O14977 448 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 INPP4BO15327 924 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SLC16A5O15375 505 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RNMTO43148 476 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 FGF16O43320 207 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 HYAL3O43820 417 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 EFNA2O43921 213 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 STC2O76061 302 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TIMP1P01033 207 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 F13BP05160 661 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 HLA-DOAP06340 250 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 GPX4P36969 197 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 MAGEA5P43359 124 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ITGA9Q13797 1035 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 DGUOKQ16854 277 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 PGGHGQ32M88 737 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 FAHD2BQ6P2I3 314 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms